系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV014801
发布时间:
2015-01-07
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
Betacoronavirus HKU24 strain HKU24-R05005I
毒株别名:
-
病毒说明:
Betacoronavirus HKU24 strain HKU24-R05005I, complete genome
物种名称:
Betacoronavirus HKU24
物种ID:
1590370
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Embecovirus, China Rattus coronavirus HKU24, Betacoronavirus HKU24]
序列长度:
31249
有效碱基数量:
31249
有效碱基百分比:
100.00%
宿主:
Rattus norvegicus
宿主补充信息:
-
分离来源:
-
测序技术:
Sanger dideoxy sequencing
组装方法:
-
覆盖度:
-
相关链接:
NC_026011
提交者:
Lau,S.K.P., Woo,P.C.Y., Li,K.S.M., Tsang,A.K.L., Fan,R.Y.Y., Luk,H.K.H., Cai,J.-P., Chan,K.-H. and Yuen,K.-Y.
提交者单位:
Department of Microbiology, The University of Hong Kong
提交者地址:
University Pathology Building, Queen Mary Hospital, Hong Kong, Hong Kong, China
样本信息
编号:
OESV014801
采样时间:
2012-05-17
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020