系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV016731
发布时间:
2019-06-28
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
BtMr-PicoV/JX2010 polyprotein gene
毒株别名:
-
病毒说明:
Bat picornavirus isolate BtMr-PicoV/JX2010 polyprotein gene, partial cds
物种名称:
Bat picornavirus
物种ID:
1281456
属名:
Kobuvirus
分类谱系:
[root, Viruses, Riboviria, Picornavirales, Picornaviridae, Kobuvirus, Aichivirus F, Bat picornavirus]
序列长度:
7555
有效碱基数量:
7555
有效碱基百分比:
100.00%
宿主:
Myotis ricketti
宿主补充信息:
-
分离来源:
-
测序技术:
Sanger dideoxy sequencing; Illumina
组装方法:
DNASTAR v. 7.1.0
覆盖度:
5
相关链接:
NC_043071
提交者:
Wu,Z., Yang,L. and Jin,Q.
提交者单位:
MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
提交者地址:
No. 6 Rongjing East Street, Yizhuang, Beijing 100176, China
样本信息
编号:
OESV016731
采样时间:
2010-10-01
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020