系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV025690
发布时间:
2017-06-13
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
Coronavirus AcCoV-JC34
毒株别名:
-
病毒说明:
Coronavirus AcCoV-JC34, complete genome
物种名称:
Coronavirus AcCoV-JC34
物种ID:
1964806
属名:
Alphacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Alphacoronavirus, unclassified Alphacoronavirus, Coronavirus AcCoV-JC34]
序列长度:
27682
有效碱基数量:
27682
有效碱基百分比:
100.00%
宿主:
Apodemus chevrieri
宿主补充信息:
-
分离来源:
-
测序技术:
Sanger dideoxy sequencing; Illumina
组装方法:
Geneious v. 5.1
覆盖度:
-
相关链接:
NC_034972
提交者:
Ge,X.-Y., Zhang,Y.-Z., Yang,W.-H., Zhou,J.-H., Li,B., Zhang,W. and Shi,Z.-L.
提交者单位:
Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology
提交者地址:
Chinese Academy of Sciences, Xiaohongshan44, Wuhan, Hubei 430071, China
样本信息
编号:
OESV025690
采样时间:
2011-10-01
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020