系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV092303
发布时间:
2016-12-14
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
NL63-related bat coronavirus strain BtKYNL63-9a
毒株别名:
-
病毒说明:
NL63-related bat coronavirus strain BtKYNL63-9a, complete genome
物种名称:
NL63-related bat coronavirus
物种ID:
1920748
属名:
Alphacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Alphacoronavirus, Setracovirus, NL63-related bat coronavirus strain BtKYNL63-9b, NL63-related bat coronavirus]
序列长度:
28363
有效碱基数量:
28349
有效碱基百分比:
99.95%
宿主:
Triaenops afer
宿主补充信息:
-
分离来源:
feces
测序技术:
Pacific Biosciences; Sanger dideoxy sequencing
组装方法:
HGAP, SMRTAnalysis v. 2.2.0
覆盖度:
-
相关链接:
NC_032107
提交者:
Tao,Y., Chommanard,C., Zhang,J., Markotter,W., Kuzmin,I. and Tong,S.
提交者单位:
Division of Viral Diseases, Centers for Disease Control and Prevention
提交者地址:
1600 Clifton Road, Atlanta, GA 30329, USA
样本信息
编号:
OESV092303
采样时间:
2010-06-21
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020