系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV118077
发布时间:
2019-12-31
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
Rousettus aegyptiacus bat coronavirus 229E-related isolate 5425
毒株别名:
-
病毒说明:
Rousettus aegyptiacus bat coronavirus 229E-related isolate 5425, complete genome
物种名称:
Rousettus aegyptiacus bat coronavirus 229E-related
物种ID:
2691585
属名:
Alphacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Alphacoronavirus, Duvinacovirus, unclassified Duvinacovirus, Rousettus aegyptiacus bat coronavirus 229E-related]
序列长度:
27619
有效碱基数量:
27619
有效碱基百分比:
100.00%
宿主:
Rousettus aegyptiacus
宿主补充信息:
-
分离来源:
-
测序技术:
Illumina
组装方法:
Galaxy v. 2019
覆盖度:
-
相关链接:
MN611517
提交者:
Li,B., Si,H.R., Zhu,Y., Yang,X.L., Anderson,D.E., Shi,Z.L., Wang,L.F. and Zhou,P.
提交者单位:
CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences
提交者地址:
No.44 Xiao Hong Shan, Wuchang District, Wuhan, Hubei 430071, China
样本信息
编号:
OESV118077
采样时间:
2018-03-01
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020