毒株信息
编号: OEAV120968 发布时间: 2020-02-05 基因组完整性: complete
病毒类型
RNA viruses
毒株名称:
Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-WA1-A12/2020
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate 2019-nCoV/USA-WA1-A12/2020, complete genome
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
29882
有效碱基数量:
29882
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
oronasopharynx
测序技术:
Nanopore; Sanger dideoxy sequencing
组装方法:
Sequencher v. 5.4.6; minimap v. 2.17
覆盖度:
100X
相关链接:
提交者:
Queen,K., Tamin,A., Harcourt,J., Tao,Y., Paden,C.R., Zhang,J., Li,Y., Uehara,A., Lu,X., Kamili,S., Gautam,R., Wang,H., Murray,J.R., Gerber,S.I., Lindstrom,S., Thornburg,N. and Tong,S.
提交者单位:
Division of Viral Diseases, Centers for Disease Control and Prevention
提交者地址:
1600 Clifton Rd NE, Atlanta, GA 30033, USA
样本信息
编号: OESV120968 采样时间: 2020-01-25
病毒注释