毒株信息
编号: OEAV142389 发布时间: 2020-03-15 基因组完整性: complete
病毒类型
RNA virus
毒株名称:
hCoV-19/Finland/FIN-318/2020
毒株别名:
-
病毒说明:
hCoV-19/Finland/FIN-318/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29777
有效碱基数量:
29378
有效碱基百分比:
98.66%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
Nasopharyngeal swap
测序技术:
Illumina Miseq
组装方法:
BWA-MEM
覆盖度:
-
相关链接:
提交者:
Teemu Smura, Hannimari Kallio-Kokko, Olli Vapalahti
提交者单位:
Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
提交者地址:
University of Helsinki, Medicum, Haartmaninkatu 3, 00290 Helsinki, Finland
样本信息
编号: OESV142389 采样时间: 2020-03-04
采样地点:
Europe / Finland
地点补充信息:
-
宿主编号:
-
宿主性别:
Male
宿主年龄:
35
采样单位:
Department of Virology and Immunology, University of Helsinki and Helsinki University Hospital, Huslab Finland
采样地址:
Topeliuksenkatu 32, PL 720, 00029 HUS, Finland