毒株信息
编号: OEAV15213012 发布时间: 2022-05-09 基因组完整性: complete
病毒类型
RNA viruses
毒株名称:
SARS-CoV-2/USA: South Dakota/USA/SD-SDAIHG-0825/2021
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/USA: South Dakota/USA/SD-SDAIHG-0825/2021, complete genome
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
29776
有效碱基数量:
29776
有效碱基百分比:
100.00%
宿主:
USA: South Dakota
宿主补充信息:
-
分离来源:
-
测序技术:
Illumina
组装方法:
DRAGEN COVIDSeq v. MAY-2022
覆盖度:
-
相关链接:
提交者:
Johnson,B.N., Beck,J., Finnicum,C.T., Silvernail,C., Vaselaar,E., Kallsen,N., Long,K., Katz,C., Pfeifle,M., Nelson,L., Huizenga,P., Streier,Z., Viet,S., Davis,C., Petersen,J., Peta,V., Do,T., Agany,D.M., Hoffman,M., Cooper,L., McFadden,L., Huber,V., Gnimpieba,E.Z. and Ehli,E.A.
提交者单位:
Biomedical Engineering, University of South Dakota
提交者地址:
4800 N Career Ave, Sioux Falls, SD 57107, USA
样本信息
编号: OESV15213012 采样时间: 2021-02-18
病毒注释