Virus Genome Toolkits

毒株信息

编号： OEAV16010495 发布时间： 2022-05-21 基因组完整性： partial

病毒类型
RNA viruses

毒株名称：

SARS-CoV-2/Bos taurus/NGA/CV4338.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes, complete cds; and ORF10 gene

毒株别名：

-

病毒说明：

Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Bos taurus/NGA/CV4338.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes, complete cds; and ORF10 gene, complete sequence

物种名称：

Severe acute respiratory syndrome coronavirus 2

物种ID：

2697049

属名：

Betacoronavirus

分类谱系：

[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]

序列长度：

29789

有效碱基数量：

26001

有效碱基百分比：

87.28%

宿主：

Bos taurus

宿主补充信息：

-

分离来源：

-

测序技术：

Illumina

组装方法：

Viral-ngs v. 2.18.0

覆盖度：

-