系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV16010528
发布时间:
2022-04-01
基因组完整性:
partial
病毒类型
RNA viruses
毒株名称:
SARS-CoV-2/Synthetic construct/GBR/Delta variant/2021 surface glycoprotein (S) gene
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Synthetic construct/GBR/Delta variant/2021 surface glycoprotein (S) gene, complete cds
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
3813
有效碱基数量:
3813
有效碱基百分比:
100.00%
宿主:
synthetic construct
宿主补充信息:
-
分离来源:
-
测序技术:
Sanger dideoxy sequencing
组装方法:
-
覆盖度:
-
相关链接:
OM858819
提交者:
Jung,J.-W. and Lomonossoff,G.P.
提交者单位:
Biochemistry and Metabolism Department, John Innes Centre
提交者地址:
Norwich research park, Colney Ln, Norwich, NFK NR4 7UH, United Kingdom
样本信息
编号:
OESV16010528
采样时间:
2021-09-27
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020