毒株信息
编号: OEAV215711 发布时间: 2020-03-09 基因组完整性: complete
病毒类型
RNA viruses
毒株名称:
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CruiseA-8/2020
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CruiseA-8/2020, complete genome
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
29882
有效碱基数量:
29882
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
oronasopharynx
测序技术:
Oxford Nanopore MinION; Sanger dideoxy sequencing
组装方法:
minimap v. 2.17; Sequencher v. 5.4.6
覆盖度:
100X
相关链接:
提交者:
Tao,Y., Paden,C.R., Queen,K., Uehara,A., Zhang,J., Li,Y., Wang,H., Kamili,S., Lu,X., Lynch,B., Sakthivel,S.K.K., Whitaker,B.L., Wang,L., Murray,J.R., Padilla,J., Lee,J., Gerber,S.I., Lindstrom,S. and Tong,S.
提交者单位:
Division of Viral Diseases, Centers for Disease Control and Prevention
提交者地址:
1600 Clifton Rd NE, Atlanta, GA 30033, USA
样本信息
编号: OESV215711 采样时间: 2020-02-17
病毒注释