系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV220030
发布时间:
2020-07-10
基因组完整性:
partial
病毒类型
RNA viruses
毒株名称:
Tv4/20_Tier-4_Covid-19
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate Tv4/20_Tier-4_Covid-19 genome assembly, complete genome: monopartite
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
29870
有效碱基数量:
29870
有效碱基百分比:
100.00%
宿主:
Mustela putorius furo
宿主补充信息:
-
分离来源:
-
测序技术:
-
组装方法:
-
覆盖度:
-
相关链接:
LR824571
提交者单位:
Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania
提交者地址:
17493, Germany
样本信息
编号:
OESV220030
采样时间:
2020-01-30
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020