系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV22382618
发布时间:
2024-04-14
基因组完整性:
-
病毒类型
RNA virus
毒株名称:
hCoV-19/opossum/Brazil/RS-LMM-73882/2022
毒株别名:
-
病毒说明:
hCoV-19/opossum/Brazil/RS-LMM-73882/2022
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29147
有效碱基数量:
26098
有效碱基百分比:
89.54%
宿主:
Didelphis albiventris
宿主补充信息:
-
分离来源:
-
测序技术:
-
组装方法:
-
覆盖度:
-
相关链接:
EPI_ISL_19050115
提交者:
Julyana Sthéfanie Simões Matos, Meriane Demoliner, Juliana Schons Gularte, Micheli Filippi, Vyctoria Malayhka de Abreu Góes Pereira, Marcelo Pereira de Barros, Fernando Rosado Spilki
提交者单位:
Laboratório de Microbiologia Molecular
样本信息
编号:
OESV22382618
采样时间:
2022-10-15
采样地点:
South America / Brazil / Rio Grande do Sul
地点补充信息:
-
宿主编号:
-
宿主性别:
Male
宿主年龄:
-
采样单位:
Laboratório de Microbiologia Molecular
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020