系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV226109
发布时间:
2020-07-27
基因组完整性:
-
病毒类型
RNA virus
毒株名称:
hCoV-19/Australia/ACT0016/2020
毒株别名:
-
病毒说明:
hCoV-19/Australia/ACT0016/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29782
有效碱基数量:
29782
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
-
测序技术:
Nanopore
组装方法:
-
覆盖度:
-
相关链接:
EPI_ISL_498483
提交者:
Ashley Jones, Benjamin Schwessinger, Robert Lanfear, Robyn N Hall, Megan McDonald, Ming-Dao Chia, Kevin Murray, Craig Kennedy, Karina Kennedy
提交者单位:
Schwessinger Lab
提交者地址:
Research School of Biology College of Science Linnaeus Building (134), Linnaeus Way The Australian National University Canberra ACT 0200 Australia
样本信息
编号:
OESV226109
采样时间:
2020-03-22
采样地点:
Oceania / Australia / Australian Capital Territory
地点补充信息:
-
采样单位:
ACT Pathology
采样地址:
Pathology Outpatients Level 1, Building 10 Canberra Hospital Gilmore Cres, Garran
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020