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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV10427352 hCoV-19/gorilla/Netherlands/ZH-EMC-1/2021 EPI_ISL_7650924 RNA virus Severe acute respiratory syndrome coronavirus 2 Netherlands 2021-11-16 Gorilla gorilla 29446 2021-12-14 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Dutch COVID-19 response team Bas Oude Munnink, Reina Sikkema, David Nieuwenhuijse, Irina Chestakova, Anne van der Linden, Marjan Boter, Emmanuelle Munger, Corine GeurtsvanKessel, Annemiek van der Eijk, Richard Molenkamp, Marion Koopmans, on behalf of the Dutch national COVID-19 response team. Erasmus Medical Center 29225 99.25
OEAV10427353 hCoV-19/gorilla/Netherlands/ZH-EMC-2/2021 EPI_ISL_7650926 RNA virus Severe acute respiratory syndrome coronavirus 2 Netherlands 2021-11-16 Gorilla gorilla 29446 2021-12-14 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Dutch COVID-19 response team Bas Oude Munnink, Reina Sikkema, David Nieuwenhuijse, Irina Chestakova, Anne van der Linden, Marjan Boter, Emmanuelle Munger, Corine GeurtsvanKessel, Annemiek van der Eijk, Richard Molenkamp, Marion Koopmans, on behalf of the Dutch national COVID-19 response team. Erasmus Medical Center 29225 99.25
OEAV10427354 hCoV-19/gorilla/Netherlands/ZH-EMC-3/2021 EPI_ISL_7650929 RNA virus Severe acute respiratory syndrome coronavirus 2 Netherlands 2021-11-16 Gorilla gorilla 29792 2021-12-14 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Dutch COVID-19 response team Bas Oude Munnink, Reina Sikkema, David Nieuwenhuijse, Irina Chestakova, Anne van der Linden, Marjan Boter, Emmanuelle Munger, Corine GeurtsvanKessel, Annemiek van der Eijk, Richard Molenkamp, Marion Koopmans, on behalf of the Dutch national COVID-19 response team. Erasmus Medical Center 29225 98.10
OEAV10427355 hCoV-19/gorilla/Netherlands/ZH-EMC-4/2021 EPI_ISL_7651169 RNA virus Severe acute respiratory syndrome coronavirus 2 Netherlands 2021-11-16 Gorilla gorilla 29776 2021-12-14 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Dutch COVID-19 response team Bas Oude Munnink, Reina Sikkema, David Nieuwenhuijse, Irina Chestakova, Anne van der Linden, Marjan Boter, Emmanuelle Munger, Corine GeurtsvanKessel, Annemiek van der Eijk, Richard Molenkamp, Marion Koopmans, on behalf of the Dutch national COVID-19 response team. Erasmus Medical Center 28967 97.28
OEAV10427356 hCoV-19/gorilla/USA/GA-21-026626-001/2021 EPI_ISL_5867579 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-01 Gorilla gorilla 29855 2021-11-02 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID University of Georgia College of Veterinary Medicine Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29855 100.00
OEAV10427357 hCoV-19/gorilla/USA/GA-21-026626-002/2021 EPI_ISL_5867581 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-01 Gorilla gorilla 29858 2021-11-02 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID University of Georgia College of Veterinary Medicine Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29858 100.00
OEAV10427358 hCoV-19/gorilla/USA/GA-21-026626-003/2021 EPI_ISL_5867582 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-01 Gorilla gorilla 29722 2021-11-02 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID University of Georgia College of Veterinary Medicine Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29722 100.00
OEAV1470936 hCoV-19/gorilla/CzechRepublic/4243-6/2021 EPI_ISL_1497615 RNA virus Severe acute respiratory syndrome coronavirus 2 Czech Republic 2021-03-03 Gorilla gorilla gorilla 29717 2021-04-07 Faeces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID State Veterinary Institute Prague Sidlistni 136/24 165 03, Prague Czech Republic Nagy,A;Cernikova,L;Stara,M State Veterinary Institute Prague 29717 100.00
OEAV1470937 hCoV-19/gorilla/CzechRepublic/5145-2/2021 EPI_ISL_1497617 RNA virus Severe acute respiratory syndrome coronavirus 2 Czech Republic 2021-03-17 Gorilla gorilla gorilla 29717 2021-04-07 Faeces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID State Veterinary Institute Prague Sidlistni 136/24 165 03, Prague Czech Republic Nagy,A;Cernikova,L;Stara,M State Veterinary Institute Prague 29717 100.00
OEAV18848803 hCoV-19/gorilla/USA/FL-BPHL-12130/2022 EPI_ISL_14713064 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-08-19 Gorilla 29681 2022-08-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Florida Bureau of Public Health Laboratories Sarah Schmedes, Namratha Tarigopula, Yibo Dong Florida Bureau of Public Health Laboratories 28767 96.92
OEAV19161943 hCoV-19/gorilla/USA/FL-BPHL-14153/2022 EPI_ISL_15361066 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-08-19 Gorilla 29681 2022-10-14 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Florida Bureau of Public Health Laboratories Sarah Schmedes, Namratha Tarigopula, Yibo Dong Florida Bureau of Public Health Laboratories 28585 96.31
OEAV5120456 SARS-CoV-2/Gorilla gorilla gorilla/CZE/4243-6/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes OL752441 RNA viruses Severe acute respiratory syndrome coronavirus 2 Czech Republic 2021-03-03 Gorilla gorilla gorilla 29717 2021-12-07 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Nagy,A., Cernikova,L. and Stara,M. Molecular Biology, State Veterinary Institute Prague 29717 100.00
OEAV5120457 SARS-CoV-2/Gorilla gorilla gorilla/CZE/5145-2/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes OL752443 RNA viruses Severe acute respiratory syndrome coronavirus 2 Czech Republic 2021-03-17 Gorilla gorilla gorilla 29717 2021-12-07 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Nagy,A., Cernikova,L. and Stara,M. Molecular Biology, State Veterinary Institute Prague 29717 100.00
OEAV589851 hCoV-19/gorilla/USA/CA-ALSR-5742/2021 EPI_ISL_862722 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-01-10 Gorilla gorilla gorilla 29782 2021-01-25 Nasal swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID San Diego County Public Health Laboratory 3851 Rosecrans St., San Diego, CA, 92110 SEARCH Alliance San Diego with Tracy Basler, Jovan Shephard, Brett Austin Andersen lab at Scripps Research 1,501.8x 28977 97.30
OEAV9239608 hCoV-19/gorilla/USA/GA-21-026420-012/2021 EPI_ISL_5850331 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-01 Gorilla gorilla 29847 2021-11-02 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID University of Georgia College of Veterinary Medicine Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29847 100.00
OEAV9239609 hCoV-19/gorilla/USA/MO-21-029402-001/2021 EPI_ISL_5899810 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Gorilla gorilla 29790 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29790 100.00
OEAV9239610 hCoV-19/gorilla/USA/MO-21-029402-003/2021 EPI_ISL_5899811 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Gorilla gorilla 29790 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29790 100.00
OEAV9239611 hCoV-19/gorilla/USA/MO-21-029402-004/2021 EPI_ISL_5899812 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Gorilla gorilla 29790 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29790 100.00
OEAV9647650 hCoV-19/gorilla/USA/CA-SEARCH-113031/2021 EPI_ISL_6257967 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-31 Gorilla 29804 2021-11-12 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID San Diego County Public Health Laboratory SEARCH Alliance San Diego with Ashleigh Murphy and Brett Austin Andersen lab at Scripps Research 28978 97.23
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