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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV16010516 SARS-CoV-2/Lacertilia/NGA/CV4307.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes ON564647 RNA viruses Severe acute respiratory syndrome coronavirus 2 Nigeria 2021-05-25 Iguania 29806 2022-05-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T. Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001 24025 80.60
OEAV16010517 SARS-CoV-2/Lacertilia/NGA/CV4308.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), and ORF3a protein (ORF3a) genes, partial cds; envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes ON564648 RNA viruses Severe acute respiratory syndrome coronavirus 2 Nigeria 2021-07-29 Iguania 29489 2022-05-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T. Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001 21204 71.90
OEAV16010518 SARS-CoV-2/Lacertilia/NGA/CV4309.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes ON564649 RNA viruses Severe acute respiratory syndrome coronavirus 2 Nigeria 2021-06-02 Iguania 29798 2022-05-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T. Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001 25592 85.88
OEAV16010519 SARS-CoV-2/Lacertilia/NGA/CV4310.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab) gene, complete cds; ORF1a polyprotein (ORF1ab) gene, partial cds; surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; ORF8 protein (ORF8) and nucleocapsid phosphoprotein (N) genes, complete cds; and ORF10 gene ON564650 RNA viruses Severe acute respiratory syndrome coronavirus 2 Nigeria 2021-05-26 Iguania 29801 2022-05-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T. Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001 25820 86.64
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