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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV392458 SARS-CoV-2/Panthera tigris/USA/tiger-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene MT724348 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-02 Panthera tigris 4016 2020-12-02 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Cardia Caserta,L. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 4016 100.00
OEAV392459 SARS-CoV-2/Panthera tigris/USA/tiger-2-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene MT724344 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 4016 2020-12-02 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Cardia Caserta,L. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 4016 100.00
OEAV392460 SARS-CoV-2/Panthera tigris/USA/tiger-3-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene MT724345 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 4016 2020-12-02 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Cardia Caserta,L. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 4016 100.00
OEAV392461 SARS-CoV-2/Panthera tigris/USA/tiger-4-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene MT724346 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 4016 2020-12-02 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Cardia Caserta,L. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 4016 100.00
OEAV392462 SARS-CoV-2/Panthera tigris/USA/tiger-5-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene MT724347 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 4016 2020-12-02 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Cardia Caserta,L. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 4016 100.00
OEAV282741 SARS-CoV-2/Panthera tigris/USA/P3_fecal_Vero/2020 MT704314 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 29882 2020-09-29 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank McAloose,D., Laverack,M., Wang,L., Killian,M.L., Cardia Caserta,L., Yuan,F., Mitchell,P.K., Queen,K., Mauldin,M.R., Cronk,B.D., Bartlett,S.L., Sykes,J.M., Zec,S., Stokol,T., Ingerman,K., Delaney,M.A., Frederikson,R., Ivancic,M., Jenkins-Moore,M., Mozingo,K., Farnzen,K., Kuzmin,I., Hines Bergeson,N., Goodman,L., Wang,H., Tong,S., Fang,Y., Olmstead,C., McCann,C., Thomas,P., Goodrich,E., Elvinger,F., Smith,D.C., Slavinski,S., Calle,P.P., Terio,K., Torchetti,M.K. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 29882 100.00
OEAV282742 SARS-CoV-2/Panthera tigris/USA/P4_TW_Vero-ATCC/2020 MT704317 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-02 Panthera tigris 29802 2020-09-29 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank McAloose,D., Laverack,M., Wang,L., Killian,M.L., Cardia Caserta,L., Yuan,F., Mitchell,P.K., Queen,K., Mauldin,M.R., Cronk,B.D., Bartlett,S.L., Sykes,J.M., Zec,S., Stokol,T., Ingerman,K., Delaney,M.A., Frederikson,R., Ivancic,M., Jenkins-Moore,M., Mozingo,K., Farnzen,K., Kuzmin,I., Hines Bergeson,N., Goodman,L., Wang,H., Tong,S., Fang,Y., Olmstead,C., McCann,C., Thomas,P., Goodrich,E., Elvinger,F., Smith,D.C., Slavinski,S., Calle,P.P., Terio,K., Torchetti,M.K. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 29802 100.00
OEAV282743 SARS-CoV-2/Panthera tigris/USA/tiger-2-040420/2020 MT704313 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 29872 2020-09-29 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank McAloose,D., Laverack,M., Wang,L., Killian,M.L., Cardia Caserta,L., Yuan,F., Mitchell,P.K., Queen,K., Mauldin,M.R., Cronk,B.D., Bartlett,S.L., Sykes,J.M., Zec,S., Stokol,T., Ingerman,K., Delaney,M.A., Frederikson,R., Ivancic,M., Jenkins-Moore,M., Mozingo,K., Farnzen,K., Kuzmin,I., Hines Bergeson,N., Goodman,L., Wang,H., Tong,S., Fang,Y., Olmstead,C., McCann,C., Thomas,P., Goodrich,E., Elvinger,F., Smith,D.C., Slavinski,S., Calle,P.P., Terio,K., Torchetti,M.K. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 29870 99.99
OEAV282744 SARS-CoV-2/Panthera tigris/USA/tiger-3-040420/2020 MT704315 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 29863 2020-09-29 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank McAloose,D., Laverack,M., Wang,L., Killian,M.L., Cardia Caserta,L., Yuan,F., Mitchell,P.K., Queen,K., Mauldin,M.R., Cronk,B.D., Bartlett,S.L., Sykes,J.M., Zec,S., Stokol,T., Ingerman,K., Delaney,M.A., Frederikson,R., Ivancic,M., Jenkins-Moore,M., Mozingo,K., Farnzen,K., Kuzmin,I., Hines Bergeson,N., Goodman,L., Wang,H., Tong,S., Fang,Y., Olmstead,C., McCann,C., Thomas,P., Goodrich,E., Elvinger,F., Smith,D.C., Slavinski,S., Calle,P.P., Terio,K., Torchetti,M.K. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 29859 99.99
OEAV282745 SARS-CoV-2/Panthera tigris/USA/tiger-4-040420/2020 MT704316 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-04-04 Panthera tigris 29834 2020-09-29 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank McAloose,D., Laverack,M., Wang,L., Killian,M.L., Cardia Caserta,L., Yuan,F., Mitchell,P.K., Queen,K., Mauldin,M.R., Cronk,B.D., Bartlett,S.L., Sykes,J.M., Zec,S., Stokol,T., Ingerman,K., Delaney,M.A., Frederikson,R., Ivancic,M., Jenkins-Moore,M., Mozingo,K., Farnzen,K., Kuzmin,I., Hines Bergeson,N., Goodman,L., Wang,H., Tong,S., Fang,Y., Olmstead,C., McCann,C., Thomas,P., Goodrich,E., Elvinger,F., Smith,D.C., Slavinski,S., Calle,P.P., Terio,K., Torchetti,M.K. and Diel,D.G. Population Medicine and Diagnostic Sciences, Cornell University 29830 99.99
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