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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV237336 hCoV-19/England/BRIS-1325C9/2020 EPI_ISL_511961 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-11 Homo sapiens 29759 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 129,788x 29759 100.00
OEAV237339 hCoV-19/England/BRIS-132CA6/2020 EPI_ISL_511974 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-15 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 188,201x 29782 100.00
OEAV237341 hCoV-19/England/BRIS-132D2B/2020 EPI_ISL_511968 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-16 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 266,281x 29782 100.00
OEAV237342 hCoV-19/England/BRIS-132D67/2020 EPI_ISL_511981 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-16 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 179,933x 29782 100.00
OEAV237344 hCoV-19/England/BRIS-132D85/2020 EPI_ISL_511972 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-16 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 66,785x 29782 100.00
OEAV237345 hCoV-19/England/BRIS-132DA3/2020 EPI_ISL_511966 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-16 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 21,130x 29780 99.99
OEAV237347 hCoV-19/England/BRIS-132DEF/2020 EPI_ISL_511960 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-14 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 120,952x 29782 100.00
OEAV237348 hCoV-19/England/BRIS-132E19/2020 EPI_ISL_511978 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-14 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 210,470x 29782 100.00
OEAV237351 hCoV-19/England/BRIS-132F61/2020 EPI_ISL_511980 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-20 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 151,378x 29782 100.00
OEAV237353 hCoV-19/England/BRIS-132FAD/2020 EPI_ISL_511964 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-20 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 115,634x 29782 100.00
OEAV237354 hCoV-19/England/BRIS-133012/2020 EPI_ISL_511973 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-22 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 148,439x 29782 100.00
OEAV237358 hCoV-19/England/BRIS-13314C/2020 EPI_ISL_511971 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-06-26 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID PHE South West Regional Laboratory, National Infection Service Pathology Sciences Building, Science Quarter, Southmead Hospital, Bristol, UK, BS10 5NB Stephanie Hutchings, Hannah Pymont, Dr Peter Muir, Barry Vipond, Rich Hopes; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 281,223x 29782 100.00
OEAV237360 hCoV-19/England/CAMB-1B385E/2020 EPI_ISL_511970 RNA virus Severe acute respiratory syndrome coronavirus 2 United Kingdom 2020-05-22 Homo sapiens 29782 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Department of Pathology, University of Cambridge Lab Block Level 5 (BOX 237), Addenbrooke's Hospital, Hills Road, Cambridge, UK, CB2 0QQ Luke W Meredith, M. Estée Török , Myra Hosmillo, William L. Hamilton, Martin D. Curran, Theresa Feltwell, Grant Hall, Anna Yakovleva, Fahad A Khokhar, Charlotte J. Houldcroft, Laura G Caller, Aminu S. Jahun, Sarah L. Caddy, Ian Goodfellow; and Alex Alderton, Roberto Amato, Sonia Goncalves, Ewan Harrison, David K. Jackson, Ian Johnston, Dominic Kwiatkowski, Cordelia Langford, John Sillitoe on behalf of the Wellcome Sanger Institute COVID-19 Surveillance Team (http://www.sanger.ac.uk/covid-team) Wellcome Sanger Institute for the COVID-19 Genomics UK Consortium 137,405x 29780 99.99
OEAV237363 hCoV-19/India/AR26/2020 EPI_ISL_511908 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-05-27 Homo sapiens 29903 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID All india institute of Medical Sciences Rishikesh Virbhadra Road, Rishikesh, Uttarakhand- 249 203, India Arindam Maitra, Deepjyoti Kalita, Amit Mangla, Ravi Kant, Saumitra Das National Institute of Biomedical Genomics - DBT's PAN-INDIA 1000 SARS--CoV-2 RNA Genome Sequencing Consortium 29903 100.00
OEAV237377 hCoV-19/India/AR64/2020 EPI_ISL_511922 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-09 Homo sapiens 29873 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID All india institute of Medical Sciences Rishikesh Virbhadra Road, Rishikesh, Uttarakhand- 249 203, India Arindam Maitra, Deepjyoti Kalita, Amit Mangla, Ravi Kant, Saumitra Das National Institute of Biomedical Genomics - DBT's PAN-INDIA 1000 SARS--CoV-2 RNA Genome Sequencing Consortium 29871 99.99
OEAV237379 hCoV-19/India/GA18/2020 EPI_ISL_511930 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-17 Homo sapiens 29901 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Government Medical College Aurangabad. Pin: 431001, India Arindam Maitra, Jyoti Iravane, Dhaval Khatri, Maitrik Dave, Saumitra Das National Institute of Biomedical Genomics - DBT's PAN-INDIA 1000 SARS--CoV-2 RNA Genome Sequencing Consortium 29901 100.00
OEAV237382 hCoV-19/India/GA58/2020 EPI_ISL_511933 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-20 Homo sapiens 29903 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Government Medical College Aurangabad. Pin: 431001, India Arindam Maitra, Jyoti Iravane, Dhaval Khatri, Maitrik Dave, Saumitra Das National Institute of Biomedical Genomics - DBT's PAN-INDIA 1000 SARS--CoV-2 RNA Genome Sequencing Consortium 29903 100.00
OEAV237384 hCoV-19/India/GA90/2020 EPI_ISL_511935 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-16 Homo sapiens 29885 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Government Medical College Aurangabad. Pin: 431001, India Arindam Maitra, Jyoti Iravane, Dhaval Khatri, Maitrik Dave, Saumitra Das National Institute of Biomedical Genomics - DBT's PAN-INDIA 1000 SARS--CoV-2 RNA Genome Sequencing Consortium 29885 100.00
OEAV237390 hCoV-19/India/GBRC324/2020 EPI_ISL_512058 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-18 Homo sapiens 29829 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID B.J. Medical College and Civil hospital, Ahmedabad Civil Hospital Campus, Haripura, Asarwa, Ahmedabad, Gujarat 380016 Monika Gandhi, Pinal Trivedi, Maharshi Pandya, Nidhi Patel, Nitin Savaliya, Raghawendra Kumar, Dinesh Kumar, Zuber Saiyed, Komal Patel, Labdhi Pandya, Afzal Ansari, Nikha Trivedi, Pranay Shah, Kamlesh J Upadhyay, Sanjay Kapadia, Apurvasinh Puvar, Janvi Raval, Zarna Patel, R D Dixit, A M Kadri, Harsh Bakshi, Chaitanya Joshi, Madhvi Joshi Gujarat Biotechnology Research Centre 3,615x 29829 100.00
OEAV237391 hCoV-19/India/GBRC325/2020 EPI_ISL_512059 RNA virus Severe acute respiratory syndrome coronavirus 2 India 2020-06-18 Homo sapiens 29831 2020-08-10 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID B.J. Medical College and Civil hospital, Ahmedabad Civil Hospital Campus, Haripura, Asarwa, Ahmedabad, Gujarat 380016 Pinal Trivedi, Maharshi Pandya, Nidhi Patel, Nitin Savaliya, Raghawendra Kumar, Dinesh Kumar, Zuber Saiyed, Komal Patel, Labdhi Pandya, Afzal Ansari, Nikha Trivedi, Pranay Shah, Kamlesh J Upadhyay, Sanjay Kapadia, Apurvasinh Puvar, Janvi Raval, Zarna Patel, Monika Gandhi, R D Dixit, A M Kadri, Harsh Bakshi, Chaitanya Joshi, Madhvi Joshi Gujarat Biotechnology Research Centre 4,131x 29831 100.00
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