MASH Ocean

Description

The Function Analysis section aims to explore the Function of microbial community of ocean samples. Users can either input their own data or select the datasets that have been pre-built by the website.

Input Type

KO-Sample

Gene-KO

Sequence

Upload KO-Sample Table(s)

Sample Name*	KO-Sample File

Merge Tool(optional)

Upload Gene-KO Table(s)

Sample Name *	Gene-KO File	Depth File

Merge Tool(optional)

Sequence Type

faa

ffn

Upload Sequence File(s)

Sample Name*	faa/ffn File	Depth File

Select MASH data

	Run ID	Project ID	Sample ID	Habitat Source	Env Zone	Env Medium	Fractionation	Location	Longitude	Latitude	Depth (m)

* For function analysis, the minimum number of samples is 1 and the maximum number of samples is 150. The result will be visualized as the form of KEGG pathway map when the number of samples is between 1 to 3, and as the form of heatmap when the number of samples is between 4 to 150.

Filter

Search ID

Habitat Source

Env Zone

Env Medium

Fractionation

Location

Longitude

Latitude

Depth (m)

KO Files

Sample Name	KO-Sample File
name1	file1
name2	file2
name3	file3

Selected Samples

SRR3623493

SRR5877433

SRR3623493

E-mail:

KO Files

Sample Name	Gene-KO File	Depth File
name1	file1	Depth File1
name2	file2	Depth File2
name3	file3	Depth File三

Selected Samples

SRR3623493

SRR5877433

SRR3623493

E-mail:

KO Files

Sample Name	faa/ffn File	Depth File
name1	sample1.faa	Depth File1
name2	sample2.ffn	Depth File2
name3	sample3.ffn	Depth File三

Selected Samples

SRR3623493

SRR5877433

SRR3623493

E-mail: