General Information
- Analysis ID
- OEZ005267
- Analysis Name
- ATAC-seq pipeline
- Description
- We used Partek Genomics Suite to map sequencing reads and remove duplicate reads to mouse reference genome mm9. Peaks were identified using HOTSPOT with default parameters (http://www.uwencode.org/proj/hotspot/). HOTSPOT analysis generates two types of peaks: narrow peak and hotspot regions (broad peak). In this study, we used the narrow peaks for downstream analysis
Analysis Information
- Analysis Type
- Other
- Pipeline
-
1
Program:
Version:
Notes:
Mapping sequencing reads and remove duplicate reads to mouse reference genome mm9
Output:
Target
- target
Analysis Data
Submitter Information
- Create Date
- 2019-12-16
- Last Modified
- 2020-07-06
- Submission
- Fei Li