General Information
- Experiment ID
- OEX014277
- Experiment Name
- genomic
- Experiment Type
- Genomic
- Description
- whole-genome sequencing
- Protocol
- DNA was extracted from peripheral blood samples obtained from each patient using DNeasy Blood Kit (Qiagen, Duesseldorf, Germany) according to the manufacturer’s instruction. DNA of the cases and controls were sent to a commercial provider (Shanghai Biotechnology Co., Ltd., Shanghai, China), which performed sequencing service using the Illumina HiSeq2500 platform. Read mapping to hg19 was performed with Burrows-Wheeler alignment (BWA (0.7.12)).
Experiment information
- Attributes
-
library_strategy WGS library_selection Hybrid Selection library_layout Paired mate_pair N platform Illumina HiSeq 2500 library_name WGS - Project
-
1
Project ID Project name Create Date OEP002514 whole-exome sequencing analysis of laterality defects patients with congenital heart disease 2021-07-21 - Samples
-
10
Sample ID Sample Name Organism Tissue Create Date OES103732 3 Homo sapiens blood 2021-07-23 OES103733 15 Homo sapiens blood 2021-07-23 OES103734 24 Homo sapiens blood 2021-07-23 OES103735 36 Homo sapiens blood 2021-07-23 OES103736 44 Homo sapiens blood 2021-07-23 OES103737 55 Homo sapiens blood 2021-07-23 OES103739 60 Homo sapiens blood 2021-07-23 OES103740 63 Homo sapiens blood 2021-07-23 OES103741 64 Homo sapiens blood 2021-07-23 OES103743 72 Homo sapiens blood 2021-07-23 - Runs
-
10
Run ID Run Name Sample Data Num Create Date OER209768 OER_Rang_2107231628 3 2 2021-07-23 OER209769 OER_Rang_2107231638 15 2 2021-07-23 OER209770 OER_Rang_2107231701 24 2 2021-07-23 OER209771 OER_Rang_2107231722 36 2 2021-07-23 OER209772 OER_Rang_2107231724 44 2 2021-07-23 OER209773 OER_Rang_2107231726 55 2 2021-07-23 OER209775 OER_Rang_2107231729 60 2 2021-07-23 OER209776 OER_Rang_2107231730 63 2 2021-07-23 OER209777 OER_Rang_2107231732 64 2 2021-07-23 OER209779 OER_Rang_2107231736 72 2 2021-07-23
Author Information
- Create Date
- 2021-07-21
- Last Modified
- 2022-11-22
- Submission
- Rang Xu
- Xinhua Hospital, School of Medicine, Shanghai Jiao Tong University