General Information
- Experiment ID
- OEX027384
- Experiment Name
- Transcriptomic
- Experiment Type
- Transcriptomic
- Description
- Transcriptome Analysis
- Protocol
- All experiments were performed according to Trizol nucleic acid extraction, GEO seq transcriptome amplification, and TruePrep® DNA Library Prep Kit V2 for Illumina® instruction manual. The experiments were carried out to extract RNA using Trizol method from organoids. Smart II and KAPA amplification were used, BGI P100 was sequenced, and sheared to approximately 300-500 bp using Q-sep instrument.
Experiment information
- Attributes
-
library_strategy RNA-Seq library_selection RT-PCR library_layout Paired mate_pair N platform MGISEQ-2000 - Project
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1
Project ID Project name Create Date OEP005097 Differentiation of islet organoids (S5D3) 2024-03-01 - Samples
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36
Sample ID Sample Name Organism Tissue Create Date OES356848 G1-35-L01 Homo sapiens hESC cell 2024-03-01 OES356849 G1-35-L02 Homo sapiens hESC cell 2024-03-01 OES356850 G1-35-L03 Homo sapiens hESC cell 2024-03-01 OES356851 G1-35-L04 Homo sapiens hESC cell 2024-03-01 OES356852 G1-36-L01 Homo sapiens hESC cell 2024-03-01 OES356853 G1-36-L02 Homo sapiens hESC cell 2024-03-01 OES356854 G1-36-L03 Homo sapiens hESC cell 2024-03-01 OES356855 G1-36-L04 Homo sapiens hESC cell 2024-03-01 OES356856 G1-37-L01 Homo sapiens hESC cell 2024-03-01 OES356857 G1-37-L02 Homo sapiens hESC cell 2024-03-01 OES356858 G1-37-L03 Homo sapiens hESC cell 2024-03-01 OES356859 G1-37-L04 Homo sapiens hESC cell 2024-03-01 OES356860 G2-38-L01 Homo sapiens hESC cell 2024-03-01 OES356861 G2-38-L02 Homo sapiens hESC cell 2024-03-01 OES356862 G2-38-L03 Homo sapiens hESC cell 2024-03-01 OES356863 G2-38-L04 Homo sapiens hESC cell 2024-03-01 OES356864 G2-39-L01 Homo sapiens hESC cell 2024-03-01 OES356865 G2-39-L02 Homo sapiens hESC cell 2024-03-01 OES356866 G2-39-L03 Homo sapiens hESC cell 2024-03-01 OES356867 G2-39-L04 Homo sapiens hESC cell 2024-03-01 OES356868 G2-40-L01 Homo sapiens hESC cell 2024-03-01 OES356869 G2-40-L02 Homo sapiens hESC cell 2024-03-01 OES356870 G2-40-L03 Homo sapiens hESC cell 2024-03-01 OES356871 G2-40-L04 Homo sapiens hESC cell 2024-03-01 OES356872 G3-32-L01 Homo sapiens hESC cell 2024-03-01 OES356873 G3-32-L02 Homo sapiens hESC cell 2024-03-01 OES356874 G3-32-L03 Homo sapiens hESC cell 2024-03-01 OES356875 G3-32-L04 Homo sapiens hESC cell 2024-03-01 OES356876 G3-33-L01 Homo sapiens hESC cell 2024-03-01 OES356877 G3-33-L02 Homo sapiens hESC cell 2024-03-01 OES356878 G3-33-L03 Homo sapiens hESC cell 2024-03-01 OES356879 G3-33-L04 Homo sapiens hESC cell 2024-03-01 OES356880 G3-34-L01 Homo sapiens hESC cell 2024-03-01 OES356881 G3-34-L02 Homo sapiens hESC cell 2024-03-01 OES356882 G3-34-L03 Homo sapiens hESC cell 2024-03-01 OES356883 G3-34-L04 Homo sapiens hESC cell 2024-03-01 - Runs
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36
Run ID Run Name Sample Data Num Create Date OER460157 G1-35-L01 G1-35-L01 2 2024-03-01 OER460158 G1-35-L02 G1-35-L02 2 2024-03-01 OER460159 G1-35-L03 G1-35-L03 2 2024-03-01 OER460160 G1-35-L04 G1-35-L04 2 2024-03-01 OER460161 G1-36-L01 G1-36-L01 2 2024-03-01 OER460162 G1-36-L02 G1-36-L02 2 2024-03-01 OER460163 G1-36-L03 G1-36-L03 2 2024-03-01 OER460164 G1-36-L04 G1-36-L04 2 2024-03-01 OER460165 G1-37-L01 G1-37-L01 2 2024-03-01 OER460166 G1-37-L02 G1-37-L02 2 2024-03-01 OER460167 G1-37-L03 G1-37-L03 2 2024-03-01 OER460168 G1-37-L04 G1-37-L04 2 2024-03-01 OER460169 G2-38-L01 G2-38-L01 2 2024-03-01 OER460170 G2-38-L02 G2-38-L02 2 2024-03-01 OER460171 G2-38-L03 G2-38-L03 2 2024-03-01 OER460172 G2-38-L04 G2-38-L04 2 2024-03-01 OER460173 G2-39-L01 G2-39-L01 2 2024-03-01 OER460174 G2-39-L02 G2-39-L02 2 2024-03-01 OER460175 G2-39-L03 G2-39-L03 2 2024-03-01 OER460176 G2-39-L04 G2-39-L04 2 2024-03-01 OER460177 G2-40-L01 G2-40-L01 2 2024-03-01 OER460178 G2-40-L02 G2-40-L02 2 2024-03-01 OER460179 G2-40-L03 G2-40-L03 2 2024-03-01 OER460180 G2-40-L04 G2-40-L04 2 2024-03-01 OER460181 G3-32-L01 G3-32-L01 2 2024-03-01 OER460182 G3-32-L02 G3-32-L02 2 2024-03-01 OER460183 G3-32-L03 G3-32-L03 2 2024-03-01 OER460184 G3-32-L04 G3-32-L04 2 2024-03-01 OER460185 G3-33-L01 G3-33-L01 2 2024-03-01 OER460186 G3-33-L02 G3-33-L02 2 2024-03-01 OER460187 G3-33-L03 G3-33-L03 2 2024-03-01 OER460188 G3-33-L04 G3-33-L04 2 2024-03-01 OER460189 G3-34-L01 G3-34-L01 2 2024-03-01 OER460190 G3-34-L02 G3-34-L02 2 2024-03-01 OER460191 G3-34-L03 G3-34-L03 2 2024-03-01 OER460192 G3-34-L04 G3-34-L04 2 2024-03-01
Author Information
- Create Date
- 2024-03-01
- Last Modified
- 2024-03-01
- Submission
- Zhiying Liao
- Guangzhou laboratory