Details

spike_validated_epi_11

  • Epitope_Source: Sars-Cov-2 epitope in PDB database
  • Antibody:Antibody EY6A
  • Literature:
    Zhou D, Duyvesteyn HME, Chen CP, Huang CG, Chen TH, Shih SR, Lin YC, Cheng CY, Cheng SH, Huang YC, Lin TY, Ma C, Huo J, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Donat RF, Godwin K, Buttigieg KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll MW, Gilbert-Jaramillo J, Knight ML, James W, Owens RJ, Naismith JH, Townsend AR, Fry EE, Zhao Y, Ren J, Stuart DI, Huang KA. Structural basis for the neutralization of SARS-CoV-2 by an antibody from a convalescent patient. Nat Struct Mol Biol. 2020 Jul 31. doi: 10.1038/s41594-020-0480-y. Epub ahead of print. PMID: 32737466.
  • PDBID:6ZER, 6ZCZ, 6ZFO, 6ZDH, 6ZDG
  • PDB_Method:X-RAY, EM
  • PDB_Resolution:3.80 Å, 2.65 Å, 4.40 Å, 3.70 Å, 4.70 Å
  • Epitope_Length:27.0
  • Epitope_position: 369 ; 374 ; 375 ; 376 ; 377 ; 378 ; 379 ; 380 ; 381 ; 382 ; 383 ; 384 ; 385 ; 386 ; 388 ; 389 ; 390 ; 392 ; 411 ; 412 ; 413 ; 414 ; 427 ; 428 ; 429 ; 430 ; 517
Antigenic clustering results between representative variants
  • AAA(SARS)
  • AAB(BatCoV)
  • AAC(SARS-CoV-2)
Heatmap based on antigenicity results between representative variants