CircID: TC-hsa-APBA1_0018
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr9:69516011~69517274
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.780795
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.2243 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.5565 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
TGGAGCAAAATGAGAGCGCAGTGAGCCGGGCCCAGCTTCTCTCCTAGCCGTTCCGACTCCCACCATGAACCACTTGGAGGGGTCTGCGGAGGTGGAGGTGACCGACGAGGCGGCAGGTGGGGAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAAGAGGAACAGCAGCAGCCGCCGCAGCAGCAGCACTATGTGGGCCGCCACCAGCGCGGGCGAGCCCTCGAGGACCTCCGCGCCCAGCTCGGCCAGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCGACGTGATCGCCGCGGCCCGCGACGGCTACGATGCGGAGCGCGCGCAGGACCCCGAGGACGAGAGCGCCTATGCTGTGCAGTACCGGCCCGAGGCCGAGGAGTACACGGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACCGGCTCTTCCACCGCGGTGAGGACGAGCCCTACTCCGAGCCCTATGCCGACTACGGCGGCCTCCAGGAGCACGTGTACGAGGAGATAGGGGACGCGCCCGAGCTGGACGCACGCGACGGCCTGCGGCTCTACGAGCAGGAGCGCGACGAGGCGGCCGCGTACCGCCAGGAGGCCCTGGGCGCGCGGCTGCACCATTACGACGAGCGCTCCGACGGCGAGTCCGACAGCCCCGAGAAGGAGGCCGAGTTCGCGCCCTACCCGCGCATGGACAGCTACGAGCAGGAGGAGGACATCGACCAGATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTCCCCCTACCCCGGCCGGGGGTCGCCCCGACAGCCCCGGGCTGCAGGCGCCGGCGGGGCAGCAGCGGGCGGTGGGCCCCGCGGGCGGCGGCGAGGCGGGGCAGCGGTACAGCAAGGAGAAGCGCGATGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAGGACCATCCGTTCGCCTTACACCCCCGACGAGCCCAAAGAGCCCATCTGGGTCATGCGCCAGGACATTAGCCCCACCAGGGACTGTGACGACCAGAGGCCGATGGACGGAGAT
Exons
- exon1:69517274~69516011
m6A sites
- 69517219
- 69517206
- 69517174
- 69517170
- 69517146
- 69517035
- 69516951
- 69516942
- 69516927
- 69516906
- 69516879
- 69516870
- 69516768
- 69516549
- 69516495
- 69516483
- 69516471
- 69516426
- 69516405
- 69516399
- 69516351
- 69516336
- 69516315
- 69516276
- 69516156
- 69516127
- 69516121
- 69516096
- 69516060
- 69516042
- 69516036
- 69516033
IRES sequence
- 69516614~69516608
- 69516163~69516158
- 69516154~69516149
- 69516059~69516054
- 69516016~69516011
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 65
- Stop: 24
- Length: 1224
- Translation cycles: 1
ATGAACCACTTGGAGGGGTCTGCGGAGGTGGAGGTGACCGACGAGGCGGCAGGTGGGGAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAAGAGGAACAGCAGCAGCCGCCGCAGCAGCAGCACTATGTGGGCCGCCACCAGCGCGGGCGAGCCCTCGAGGACCTCCGCGCCCAGCTCGGCCAGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCGACGTGATCGCCGCGGCCCGCGACGGCTACGATGCGGAGCGCGCGCAGGACCCCGAGGACGAGAGCGCCTATGCTGTGCAGTACCGGCCCGAGGCCGAGGAGTACACGGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACCGGCTCTTCCACCGCGGTGAGGACGAGCCCTACTCCGAGCCCTATGCCGACTACGGCGGCCTCCAGGAGCACGTGTACGAGGAGATAGGGGACGCGCCCGAGCTGGACGCACGCGACGGCCTGCGGCTCTACGAGCAGGAGCGCGACGAGGCGGCCGCGTACCGCCAGGAGGCCCTGGGCGCGCGGCTGCACCATTACGACGAGCGCTCCGACGGCGAGTCCGACAGCCCCGAGAAGGAGGCCGAGTTCGCGCCCTACCCGCGCATGGACAGCTACGAGCAGGAGGAGGACATCGACCAGATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTCCCCCTACCCCGGCCGGGGGTCGCCCCGACAGCCCCGGGCTGCAGGCGCCGGCGGGGCAGCAGCGGGCGGTGGGCCCCGCGGGCGGCGGCGAGGCGGGGCAGCGGTACAGCAAGGAGAAGCGCGATGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAGGACCATCCGTTCGCCTTACACCCCCGACGAGCCCAAAGAGCCCATCTGGGTCATGCGCCAGGACATTAGCCCCACCAGGGACTGTGACGACCAGAGGCCGATGGACGGAGATTGGAGCAAAATGAGAGCGCAGTGA
MNHLEGSAEVEVTDEAAGGEVNESVEADLEHPEVEEEQQQPPQQQHYVGRHQRGRALEDLRAQLGQEEEERGECLARSASTESGFHNHTDTAEGDVIAAARDGYDAERAQDPEDESAYAVQYRPEAEEYTEQAEAEHAEATHRRALPNHLHFHSLEHEEAMNAAYSGYVYTHRLFHRGEDEPYSEPYADYGGLQEHVYEEIGDAPELDARDGLRLYEQERDEAAAYRQEALGARLHHYDERSDGESDSPEKEAEFAPYPRMDSYEQEEDIDQIVAEVKQSMSSQSLDKAAEDMPEAEQDLERPPTPAGGRPDSPGLQAPAGQQRAVGPAGGGEAGQRYSKEKRDAISLAIKDIKEAIEEVKTRTIRSPYTPDEPKEPIWVMRQDISPTRDCDDQRPMDGDWSKMRAQ*