CircID: TC-hsa-ATXN2_0132
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr12:111552280~111569266
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.934357
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.36731 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.56705 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
AGGTCGAAACAGTAACAAAGGACTGCCTCAGTCTACGATTTCTTTTGATGGAATCTATGCAAATATGAGGATGGTTCATATACTTACATCAGTTGTTGGCTCCAAATGTGAAGTACAAGTGAAAAATGGAGGTATATATGAAGGAGTTTTTAAAACTTACAGTCCGAAGTGTGATTTGGTACTTGATGCCGCACATGAGAAAAGTACAGAATCCAGTTCGGGGCCGAAACGTGAAGAAATAATGGAGAGTATTTTGTTCAAATGTTCAGACTTTGTTGTGGTACAGTTTAAAGATATGGACTCCAGTTATGCAAAAAGAG
Exons
- exon1:111555919~111555883
- exon2:111554217~111554158
- exon3:111552977~111552906
- exon4:111552430~111552280
IRES sequence
- 111555915~111555910
- 111554194~111554189
- 111554178~111554171
- 111552953~111552948
- 111552942~111552935
- 111552926~111552921
- 111552375~111552370
- 111552367~111552357
- 111552350~111552345
- 111552313~111552303
- 111552288~111552281
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 65
- Stop: 68
- Length: 324
- Translation cycles: 1
ATGAGGATGGTTCATATACTTACATCAGTTGTTGGCTCCAAATGTGAAGTACAAGTGAAAAATGGAGGTATATATGAAGGAGTTTTTAAAACTTACAGTCCGAAGTGTGATTTGGTACTTGATGCCGCACATGAGAAAAGTACAGAATCCAGTTCGGGGCCGAAACGTGAAGAAATAATGGAGAGTATTTTGTTCAAATGTTCAGACTTTGTTGTGGTACAGTTTAAAGATATGGACTCCAGTTATGCAAAAAGAGAGGTCGAAACAGTAACAAAGGACTGCCTCAGTCTACGATTTCTTTTGATGGAATCTATGCAAATATGA