TransCirc

CircID: TC-hsa-ATXN3_0031

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr14:92083126~92088817

Gene:

ATXN3

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-ATXN3_0047

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.882718 MS Q-Value:
ORF	1.0
IRES sequence	0.30604
Translation initiation site	0.0
SeqComp	0.57668
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAG

Exons

exon1:92088817~92088730
exon2:92083258~92083126

IRES sequence

92088783~92088774
92088769~92088762
92083251~92083246
92083193~92083188
92083155~92083148
92083137~92083132

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 151
Stop: 13
Length: 84
Translation cycles: 1

ATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGTGGTTTAACTTGA

MIRVQQMHRPKLIGEELAQLKEQSGLT*