TransCirc

CircID: TC-hsa-AZGP1_0001

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr7:99966867~99967167

Gene:

AZGP1

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-AZGP1_0008

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 3.030606 MS Q-Value: 0.000341
ORF	1.0
IRES sequence	0.03061
Translation initiation site	0.0
SeqComp	1.0
m6A sites	0.0
MS evidence	1.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTGCAGGAGCCTGAGTTACGGGGAGATGTTCTTCACAATGGAAATGGCACTTACCAGTCCTGGGTGGTGGTGGCAGTGCCCCCGCAGGACACAGCCCCCTACTCCTGCCACGTGCAGCACAGCAGCCTGGCCCAGCCCCTCGTGGTGCCCTGGGAGGCCAGCTAGGAAGCAAGGGTTGGAGGCAATGTGGGATCTCAGACCCAGTAGCTGCCCTTCCTGCCTGATGTGGGAGCTGAACCACAGAAATCACAGTCAATGGATCCACAAGGCCTGAGGAGCAGTGTGGGGGGACAGACAGGAG

Exons

exon1:99967167~99966867

IRES sequence

99967146~99967141

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 208
Stop: 14
Length: 108
Translation cycles: 1

CTGCCCTTCCTGCCTGATGTGGGAGCTGAACCACAGAAATCACAGTCAATGGATCCACAAGGCCTGAGGAGCAGTGTGGGGGGACAGACAGGAGGTGCAGGAGCCTGA

LPFLPDVGAEPQKSQSMDPQGLRSSVGGQTGGAGA*

Start: 281
Stop: 165
Length: 186
Translation cycles: 1

GTGTGGGGGGACAGACAGGAGGTGCAGGAGCCTGAGTTACGGGGAGATGTTCTTCACAATGGAAATGGCACTTACCAGTCCTGGGTGGTGGTGGCAGTGCCCCCGCAGGACACAGCCCCCTACTCCTGCCACGTGCAGCACAGCAGCCTGGCCCAGCCCCTCGTGGTGCCCTGGGAGGCCAGCTAG

VWGDRQEVQEPELRGDVLHNGNGTYQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEAS*

Q-Value: 0.0020655

Q-Value: 3.4138E-4