TransCirc

CircID: TC-hsa-BRAP_0014

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr12:111655566~111660675

Gene:

BRAP

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-BRAP_0002
deepbase2: hsa-circRNA10122-11
circpedia2: HSA_CIRCpedia_6705

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.90412 MS Q-Value:
ORF	1.0
IRES sequence	0.34764
Translation initiation site	0.0
SeqComp	0.55648
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTGTCCTGTTTGCCGGTACTGTCAAACGCCCGAGCCAGTAGAAGAAAATAAGTGTTTTGAGTGTGGTGTTCAGGAAAATCTTTGGATTTGTTTAATATGCGGCCACATAGGATGTGGACGGTATGTCAGTCGACATGCTTATAAGCACTTTGAGGAAACGCAGCACACGTATGCCATGCAGCTTACCAACCATCGAGTCTGGGACTATGCTGGAGATAACTATGTTCATCGACTGGTTGCAAGTAAAACAGATGGAAAAATAGTACAGTATGAATGTGAGGGGGATACTTGCCAGGAAGAGAAAATAGATGCCTTACAGTTAGAGTATTCATATTTACTAACAAGCCAGCTGGAATCTCAGCGAATCTACTGGGAAAACAAGATAGTTCGGATAGAGAAGGACACAGCAGAGGAA

Exons

exon1:111660675~111660600
exon2:111659345~111659207
exon3:111658845~111658736
exon4:111655655~111655566

IRES sequence

111660636~111660623
111659330~111659324
111659283~111659278
111659210~111658843
111658805~111658799
111658759~111658752
111655605~111655596

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 370
Stop: 41
Length: 87
Translation cycles: 1

CTGGGAAAACAAGATAGTTCGGATAGAGAAGGACACAGCAGAGGAAGTGTCCTGTTTGCCGGTACTGTCAAACGCCCGAGCCAGTAG

LGKQDSSDREGHSRGSVLFAGTVKRPSQ*

Start: 176
Stop: 51
Length: 291
Translation cycles: 1

ATGCAGCTTACCAACCATCGAGTCTGGGACTATGCTGGAGATAACTATGTTCATCGACTGGTTGCAAGTAAAACAGATGGAAAAATAGTACAGTATGAATGTGAGGGGGATACTTGCCAGGAAGAGAAAATAGATGCCTTACAGTTAGAGTATTCATATTTACTAACAAGCCAGCTGGAATCTCAGCGAATCTACTGGGAAAACAAGATAGTTCGGATAGAGAAGGACACAGCAGAGGAAGTGTCCTGTTTGCCGGTACTGTCAAACGCCCGAGCCAGTAGAAGAAAATAA

MQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEVSCLPVLSNARASRRK*