TransCirc

CircID: TC-hsa-BRCC3_0009

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chrX:155115299~155120168

Gene:

BRCC3

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-MTCP1_0003

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.998003 MS Q-Value:
ORF	1.0
IRES sequence	0.22588
Translation initiation site	0.0
SeqComp	0.77212
m6A sites	1.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

CCTTACACATCTGGACTCAGTAACCAAGATCCATAATGGCTCAGTGTTTACCAAGAATCTGTGCAGTCAGATGTCGGCAGTCAGCGGGCCTCTCCTACAGTGGTTGGAGGACAGACTGGAGCAAAACCAACAGCATTTGCAGGAATTACAACAAGAAAAGGAAGAGCTTATGCAAGAACTTTCTTCTCTAGAATAAATCAGGAGACAAAATGGG

Exons

exon1:155116711~155116754
exon2:155119999~155120168

m6A sites

155120065
155120069
155120080
155120084
155120105
155120132
155120159

IRES sequence

155120007~155120012
155120146~155120152
155120159~155120164

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 61
Stop: 23
Length: 177
Translation cycles: 1

GTGCAGTCAGATGTCGGCAGTCAGCGGGCCTCTCCTACAGTGGTTGGAGGACAGACTGGAGCAAAACCAACAGCATTTGCAGGAATTACAACAAGAAAAGGAAGAGCTTATGCAAGAACTTTCTTCTCTAGAATAAATCAGGAGACAAAATGGGCCTTACACATCTGGACTCAGTAA

VQSDVGSQRASPTVVGGQTGAKPTAFAGITTRKGRAYARTFFSRINQETKWALHIWTQ*

Start: 210
Stop: 196
Length: 201
Translation cycles: 1

ATGGGCCTTACACATCTGGACTCAGTAACCAAGATCCATAATGGCTCAGTGTTTACCAAGAATCTGTGCAGTCAGATGTCGGCAGTCAGCGGGCCTCTCCTACAGTGGTTGGAGGACAGACTGGAGCAAAACCAACAGCATTTGCAGGAATTACAACAAGAAAAGGAAGAGCTTATGCAAGAACTTTCTTCTCTAGAATAA

MGLTHLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQEKEELMQELSSLE*