CircID: TC-hsa-CACHD1_0025
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:64582156~64629481
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.914355
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.34853 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.56582 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
CTAGCCAAAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAACAAGCAAGTTGTAGAAGCATCCTATACGGCTCACCTAACCTCTCCCCTAACTGCAATTCAAGACTGCTGTACTATCCCACCTTCCATGATGGAATTCGATGGGAACTTTAATACCAATGTGTCTAGAACAATTAGTTGTGATCGACTTTCTACTACTGTTAATAGCCGGGCCTTCAATCCAGGACGAGACTTAAATTCAGTTCTTGCAGACAACCTGAAATCCAACCCTGGAATTAAGTGGCAATATTTCAGTTCAGAAGAAGGAATTTTCACTGTTTTCCCAGCACACAAGTTCCGGTGTAAGGGCAGCTACGAACACCGCAGTAG
Exons
- exon1:64582156~64582304
- exon2:64602806~64602912
- exon3:64629355~64629481
IRES sequence
- 64582161~64582171
- 64582266~64582271
- 64602806~64602811
- 64602820~64602825
- 64602871~64602876
- 64602905~64602911
- 64629372~64629377
- 64629386~64629391
- 64629397~64629402
- 64629410~64629417
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 142
- Stop: 4
- Length: 246
- Translation cycles: 1
- Start: 284
- Stop: 167
- Length: 267
- Translation cycles: 1