CircID: TC-hsa-CDK11B_0008
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1652469~1657498
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.208613
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.35627 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.85234 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
TGTTTTAACTCAAATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCACAGAAAAGATGAAAAGAGAAAAGAGAAAC
Exons
- exon1:1657498~1657375
- exon2:1655484~1655369
- exon3:1652566~1652469
IRES sequence
- 1657442~1657437
- 1657430~1657425
- 1657395~1657387
- 1657382~1655483
- 1655422~1655417
- 1655413~1655408
- 1655394~1655384
- 1652563~1652555
- 1652494~1652489
- 1652486~1652481
- 1652479~1652474
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 14
- Stop: 8
- Length: 333
- Translation cycles: 1
ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGAACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGGAGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAAGACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCACAGAAAAGATGAAAAGAGAAAAGAGAAACTGTTTTAA