CircID: TC-hsa-CEP162_0051
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr6:84185187~84204096
Xref:
circAtlas: hsa-CEP162_0003
circRNADb: hsa_circ_25943
deepbase2: hsa-circRNA14824-12
circpedia2: HSA_CIRCpedia_55678
circRNADb: hsa_circ_25943
deepbase2: hsa-circRNA14824-12
circpedia2: HSA_CIRCpedia_55678
Evidences
| Ribosome/polysome profiling | 0.33333 |
Evidence score: 2.556859
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.5156 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.70793 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
AAAATTACAGTGATGATTTTGAAGATGAGTATGTTGGTGCACCGTTGACTACTAAAGATGAAGAGATGCCTTCCAAAGAGAATTCCAAATCAGAAAAAATAAGTGTGCCCAAACAGGAAGAAGAAAAAACTGGCATGCTTGCTAATGTTGTGCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAGGTGCCTACCAGAAATGACTGAGAATGAAATGACAGGAACAGGTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAGCCCTACATCAAGCTTATTGTCATATAGCCCATTCATTGGGAGATGAAGACAAACAAAAAATTGAGAGTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGGTCATCCTCAAGAAAATGAAGAGAATTCAAAAAACATCTCTACTATGGAATCTGATCTGCCCACAGTAGAGGAGCTGATGAAACCTATCAGAATAGATTCCTTTGGGATCAGTGGTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGGCCGAAAGAAAAGAAACTGAATTTTTTAGCTCTTTACCCCTGAAGATGAACCCAAATATTTTGTCTCAAGACTCACAACATGTGAACCTTTTTTTTGACAAAAATGATGAGAATGTGATTTTACAAAAGACCACAAATGAGAGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACTGCCACAGAAGAACATGTTGATAAAATGTACCTTAATATTTTGAGGAAAAAAATAACTGTTAATTCTTCATCATTATCTCAGGATGACAAAATTAATAAAACTTACAGATCTCAACTTAGTTCTGAAGAAGAAGGGGCTGTAATGGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTTTACTTAAAAGGAAACCCCAGAGTGGATTATATGCGTCAGTTAGGAGCTCAGGCTATGGCAAACCCAGTTCACCACTCAAGATGTTTTCTACTCTTGAAAAGAAAACTTCAGAGGACATTATAAAAAGCAAAAACTTGAGATCGATTTCTACCTCCAATCAACCTAGGAAAAAAG
Exons
- exon1:84204096~84203981
- exon2:84201767~84201737
- exon3:84200905~84200789
- exon4:84195075~84194884
- exon5:84193690~84193609
- exon6:84186623~84186332
- exon7:84185448~84185187
IRES sequence
- 84204096~84204090
- 84204003~84203993
- 84201767~84201755
- 84200890~84200885
- 84200854~84200843
- 84195033~84195027
- 84195019~84195013
- 84195001~84194996
- 84194989~84194978
- 84194961~84194951
- 84194914~84194901
- 84193653~84193646
- 84186602~84186597
- 84186596~84186591
- 84186557~84186549
- 84186513~84186506
- 84186488~84186480
- 84186443~84186438
- 84186425~84186419
- 84186411~84186406
- 84186399~84186390
- 84186385~84186376
- 84186345~84185448
- 84185424~84185415
- 84185401~84185396
- 84185389~84185380
- 84185335~84185328
- 84185264~84185259
- 84185244~84185235
- 84185233~84185228
- 84185205~84185200
- 84185193~84204096
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 66
- Stop: 65
- Length: 3276
- Translation cycles: 3
ATGCCTTCCAAAGAGAATTCCAAATCAGAAAAAATAAGTGTGCCCAAACAGGAAGAAGAAAAAACTGGCATGCTTGCTAATGTTGTGCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAGGTGCCTACCAGAAATGACTGAGAATGAAATGACAGGAACAGGTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAGCCCTACATCAAGCTTATTGTCATATAGCCCATTCATTGGGAGATGAAGACAAACAAAAAATTGAGAGTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGGTCATCCTCAAGAAAATGAAGAGAATTCAAAAAACATCTCTACTATGGAATCTGATCTGCCCACAGTAGAGGAGCTGATGAAACCTATCAGAATAGATTCCTTTGGGATCAGTGGTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGGCCGAAAGAAAAGAAACTGAATTTTTTAGCTCTTTACCCCTGAAGATGAACCCAAATATTTTGTCTCAAGACTCACAACATGTGAACCTTTTTTTTGACAAAAATGATGAGAATGTGATTTTACAAAAGACCACAAATGAGAGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACTGCCACAGAAGAACATGTTGATAAAATGTACCTTAATATTTTGAGGAAAAAAATAACTGTTAATTCTTCATCATTATCTCAGGATGACAAAATTAATAAAACTTACAGATCTCAACTTAGTTCTGAAGAAGAAGGGGCTGTAATGGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTTTACTTAAAAGGAAACCCCAGAGTGGATTATATGCGTCAGTTAGGAGCTCAGGCTATGGCAAACCCAGTTCACCACTCAAGATGTTTTCTACTCTTGAAAAGAAAACTTCAGAGGACATTATAAAAAGCAAAAACTTGAGATCGATTTCTACCTCCAATCAACCTAGGAAAAAAGAAAATTACAGTGATGATTTTGAAGATGAGTATGTTGGTGCACCGTTGACTACTAAAGATGAAGAGATGCCTTCCAAAGAGAATTCCAAATCAGAAAAAATAAGTGTGCCCAAACAGGAAGAAGAAAAAACTGGCATGCTTGCTAATGTTGTGCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAGGTGCCTACCAGAAATGACTGAGAATGAAATGACAGGAACAGGTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAGCCCTACATCAAGCTTATTGTCATATAGCCCATTCATTGGGAGATGAAGACAAACAAAAAATTGAGAGTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGGTCATCCTCAAGAAAATGAAGAGAATTCAAAAAACATCTCTACTATGGAATCTGATCTGCCCACAGTAGAGGAGCTGATGAAACCTATCAGAATAGATTCCTTTGGGATCAGTGGTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGGCCGAAAGAAAAGAAACTGAATTTTTTAGCTCTTTACCCCTGAAGATGAACCCAAATATTTTGTCTCAAGACTCACAACATGTGAACCTTTTTTTTGACAAAAATGATGAGAATGTGATTTTACAAAAGACCACAAATGAGAGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACTGCCACAGAAGAACATGTTGATAAAATGTACCTTAATATTTTGAGGAAAAAAATAACTGTTAATTCTTCATCATTATCTCAGGATGACAAAATTAATAAAACTTACAGATCTCAACTTAGTTCTGAAGAAGAAGGGGCTGTAATGGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTTTACTTAAAAGGAAACCCCAGAGTGGATTATATGCGTCAGTTAGGAGCTCAGGCTATGGCAAACCCAGTTCACCACTCAAGATGTTTTCTACTCTTGAAAAGAAAACTTCAGAGGACATTATAAAAAGCAAAAACTTGAGATCGATTTCTACCTCCAATCAACCTAGGAAAAAAGAAAATTACAGTGATGATTTTGAAGATGAGTATGTTGGTGCACCGTTGACTACTAAAGATGAAGAGATGCCTTCCAAAGAGAATTCCAAATCAGAAAAAATAAGTGTGCCCAAACAGGAAGAAGAAAAAACTGGCATGCTTGCTAATGTTGTGCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAGGTGCCTACCAGAAATGACTGAGAATGAAATGACAGGAACAGGTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAGCCCTACATCAAGCTTATTGTCATATAGCCCATTCATTGGGAGATGAAGACAAACAAAAAATTGAGAGTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGGTCATCCTCAAGAAAATGAAGAGAATTCAAAAAACATCTCTACTATGGAATCTGATCTGCCCACAGTAGAGGAGCTGATGAAACCTATCAGAATAGATTCCTTTGGGATCAGTGGTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGGCCGAAAGAAAAGAAACTGAATTTTTTAGCTCTTTACCCCTGAAGATGAACCCAAATATTTTGTCTCAAGACTCACAACATGTGAACCTTTTTTTTGACAAAAATGATGAGAATGTGATTTTACAAAAGACCACAAATGAGAGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACTGCCACAGAAGAACATGTTGATAAAATGTACCTTAATATTTTGAGGAAAAAAATAACTGTTAATTCTTCATCATTATCTCAGGATGACAAAATTAATAAAACTTACAGATCTCAACTTAGTTCTGAAGAAGAAGGGGCTGTAATGGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTTTACTTAAAAGGAAACCCCAGAGTGGATTATATGCGTCAGTTAGGAGCTCAGGCTATGGCAAACCCAGTTCACCACTCAAGATGTTTTCTACTCTTGAAAAGAAAACTTCAGAGGACATTATAAAAAGCAAAAACTTGAGATCGATTTCTACCTCCAATCAACCTAGGAAAAAAGAAAATTACAGTGATGATTTTGAAGATGAGTATGTTGGTGCACCGTTGACTACTAAAGATGAAGAG
MPSKENSKSEKISVPKQEEEKTGMLANVVLLDSLDSVAEVNLDEQDKITPKPRCLPEMTENEMTGTGVSYGQSSSDVEALHQAYCHIAHSLGDEDKQKIESNTVEDIKSSVKGHPQENEENSKNISTMESDLPTVEELMKPIRIDSFGISGFDLQPVSSEKVAERKETEFFSSLPLKMNPNILSQDSQHVNLFFDKNDENVILQKTTNESMENSCPQVTEVTATEEHVDKMYLNILRKKITVNSSSLSQDDKINKTYRSQLSSEEEGAVMGKQVPYKKARSAPPLLKRKPQSGLYASVRSSGYGKPSSPLKMFSTLEKKTSEDIIKSKNLRSISTSNQPRKKENYSDDFEDEYVGAPLTTKDEEMPSKENSKSEKISVPKQEEEKTGMLANVVLLDSLDSVAEVNLDEQDKITPKPRCLPEMTENEMTGTGVSYGQSSSDVEALHQAYCHIAHSLGDEDKQKIESNTVEDIKSSVKGHPQENEENSKNISTMESDLPTVEELMKPIRIDSFGISGFDLQPVSSEKVAERKETEFFSSLPLKMNPNILSQDSQHVNLFFDKNDENVILQKTTNESMENSCPQVTEVTATEEHVDKMYLNILRKKITVNSSSLSQDDKINKTYRSQLSSEEEGAVMGKQVPYKKARSAPPLLKRKPQSGLYASVRSSGYGKPSSPLKMFSTLEKKTSEDIIKSKNLRSISTSNQPRKKENYSDDFEDEYVGAPLTTKDEEMPSKENSKSEKISVPKQEEEKTGMLANVVLLDSLDSVAEVNLDEQDKITPKPRCLPEMTENEMTGTGVSYGQSSSDVEALHQAYCHIAHSLGDEDKQKIESNTVEDIKSSVKGHPQENEENSKNISTMESDLPTVEELMKPIRIDSFGISGFDLQPVSSEKVAERKETEFFSSLPLKMNPNILSQDSQHVNLFFDKNDENVILQKTTNESMENSCPQVTEVTATEEHVDKMYLNILRKKITVNSSSLSQDDKINKTYRSQLSSEEEGAVMGKQVPYKKARSAPPLLKRKPQSGLYASVRSSGYGKPSSPLKMFSTLEKKTSEDIIKSKNLRSISTSNQPRKKENYSDDFEDEYVGAPLTTKDEE