TransCirc

CircID: TC-hsa-CHM_0041

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chrX:86027491~86047556

Gene:

CHM

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-CHM_0042

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 3.019266 MS Q-Value:
ORF	1.0
IRES sequence	0.01927
Translation initiation site	1.0
SeqComp	1.0
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TCACATGACACGTTTCCCGTCAAGATGGCGGATACTCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCGGAGAGTTCTGCATGTTGATTC

Exons

exon1:86047556~86047484
exon2:86027557~86027491

IRES sequence

86027523~86027518

Translation initiation site

86047533~86047531

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 25
Stop: 58
Length: 174
Translation cycles: 1

ATGGCGGATACTCTCCCTTCGGAGTTTGATGTGATCGTAATAGGGACGGGTTTGCCTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCGGAGAGTTCTGCATGTTGATTCTCACATGACACGTTTCCCGTCAAGATGGCGGATACTCTCCCTTCGGAGTTTGATGTGA

MADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSHMTRFPSRWRILSLRSLM*

Start: 80
Stop: 8
Length: 69
Translation cycles: 1

CTGAATCCATCATTGCAGCTGCATGTTCAAGAAGTGGCCGGAGAGTTCTGCATGTTGATTCTCACATGA

LNPSLQLHVQEVAGEFCMLILT*