CircID: TC-hsa-DNAH14_0320
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:225374688~225381579
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.171992
MS Q-Value: 0.00308
|
| ORF | 1.0 | |
| IRES sequence | 0.4013 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.77069 | |
| m6A sites | 0.0 | |
| MS evidence | 1.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GATCTGCAAGCATAAAGGACTACATACACATTATCCAGTCCTTACCTGATGATGACCTTCCCGAGGTCTTAGGAATACACCCAGAGGCCATCAGGAGCTGCTGGGAGACCCAGGGCGAAAAGTTTATTGAAAATCTGATTGCCATGCAACCAAAAACTACCACTGCCAACCTCATGATCAGACCTGAGCAGAGTAAGGATGAACTGGTGATGGAAATTCTATCCGACTTGCTAAAGCGGCTGCCACTGACAGTGGAGAAAGAAGAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGTCTCTTTCTAAAAATCTCAAAGATCACGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACGATTTGATAAGTTATTATTTGTCATACATAAATCCTTAAAAGATCTTCAGCTTGCTATAAAAGGAGAGATCATCCTCACCCAAGAATTGGAGGAAATATTTAACTCTTTTCTTAATATGAGAGTGCCTACATTGTGGCAG
Exons
- exon1:225377256~225377436
- exon2:225380159~225380322
- exon3:225381383~225381579
IRES sequence
- 225377267~225377272
- 225377329~225377334
- 225377406~225377411
- 225380191~225380196
- 225380236~225380243
- 225380283~225380288
- 225380309~225380315
- 225381431~225381437
- 225381446~225381451
- 225381453~225381458
- 225381465~225381474
- 225381477~225381482
- 225381495~225381501
- 225381521~225381526
- 225381533~225381542
- 225381551~225381557
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 536
- Stop: 15
- Length: 564
- Translation cycles: 2
GTGGCAGGATCTGCAAGCATAAAGGACTACATACACATTATCCAGTCCTTACCTGATGATGACCTTCCCGAGGTCTTAGGAATACACCCAGAGGCCATCAGGAGCTGCTGGGAGACCCAGGGCGAAAAGTTTATTGAAAATCTGATTGCCATGCAACCAAAAACTACCACTGCCAACCTCATGATCAGACCTGAGCAGAGTAAGGATGAACTGGTGATGGAAATTCTATCCGACTTGCTAAAGCGGCTGCCACTGACAGTGGAGAAAGAAGAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGTCTCTTTCTAAAAATCTCAAAGATCACGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACGATTTGATAAGTTATTATTTGTCATACATAAATCCTTAAAAGATCTTCAGCTTGCTATAAAAGGAGAGATCATCCTCACCCAAGAATTGGAGGAAATATTTAACTCTTTTCTTAATATGAGAGTGCCTACATTGTGGCAGGATCTGCAAGCATAA
- Start: 144
- Stop: 15
- Length: 414
- Translation cycles: 1
ATGCAACCAAAAACTACCACTGCCAACCTCATGATCAGACCTGAGCAGAGTAAGGATGAACTGGTGATGGAAATTCTATCCGACTTGCTAAAGCGGCTGCCACTGACAGTGGAGAAAGAAGAAATTGCTGTTGGAACTCCAAGCACATTGAAGAGCATGATGTCAAGCTCCATTTGGGAGTCTCTTTCTAAAAATCTCAAAGATCACGACCCCCTTATCCATTGTGTCTTGCTAACCTTTTTGAAGCAAGAAATTAAACGATTTGATAAGTTATTATTTGTCATACATAAATCCTTAAAAGATCTTCAGCTTGCTATAAAAGGAGAGATCATCCTCACCCAAGAATTGGAGGAAATATTTAACTCTTTTCTTAATATGAGAGTGCCTACATTGTGGCAGGATCTGCAAGCATAA