CircID: TC-hsa-DNAJC3_0014
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr13:95757644~95760221
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.948126
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.37386 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.57427 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
CTCAAATCTAATCCAAGTGAAAATGAAGAAAAGGAAGCACAGTCTCAACTTATAAAATCTGATGAAATGCAGCGTTTGCGTTCACAAGCACTTAACGCTTTTGGAAGTGGAGATTATACTGCTGCTATAGCCTTCCTTGATAAGATTTTAGAGGTTTGTGTTTGGGATGCAGAACTACGGGAACTTCGAGCTGAATGTTTTATAAAAGAAGGAGAACCTAGGAAAGCTATAAGTGACTTAAAAGCTGCGTCAAAGTTGAAGAATGATAATACTGAAGCGTTTTATAAAATAAGCACACTGTACTACCAACTAGGAGACCACGAACTGTCCCTCAG
Exons
- exon1:95757644~95757796
- exon2:95760040~95760221
IRES sequence
- 95757668~95757673
- 95757693~95757700
- 95757752~95757764
- 95757783~95757788
- 95760086~95760097
- 95760115~95760120
- 95760144~95760150
- 95760152~95760160
- 95760168~95760179
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 67
- Stop: 55
- Length: 324
- Translation cycles: 1
ATGCAGCGTTTGCGTTCACAAGCACTTAACGCTTTTGGAAGTGGAGATTATACTGCTGCTATAGCCTTCCTTGATAAGATTTTAGAGGTTTGTGTTTGGGATGCAGAACTACGGGAACTTCGAGCTGAATGTTTTATAAAAGAAGGAGAACCTAGGAAAGCTATAAGTGACTTAAAAGCTGCGTCAAAGTTGAAGAATGATAATACTGAAGCGTTTTATAAAATAAGCACACTGTACTACCAACTAGGAGACCACGAACTGTCCCTCAGCTCAAATCTAATCCAAGTGAAAATGAAGAAAAGGAAGCACAGTCTCAACTTATAA