CircID: TC-hsa-EDC4_0004
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr16:67879412~67880216
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.01763
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.01763 | |
| Translation initiation site | 0.0 | |
| SeqComp | 1.0 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GGCACTGCAAGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTGCCCACCCACACTGCCCACGAGGACTTCACATTTGGAGAGTCTCGGCCCGAACTGGGCTCTGAGGGCCTGGGGTCAGCCGCTCACGGCTCCCAGCCTGACCTCCGACGAATCGTGGAGCTGCCTGCACCTGCCGACTTCCTCAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTGACGCCTTCATGACACCTAGCGCCTCCTTGCAGCAGATCACTGCCTCTCCCAGCAGCAGCAGCAGCGGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCTCCCTTACAGCTGTGTCTGCCATGAGCAGCACCTCAGCTGTGGACCCCTCCTTGACCAGGCCACCTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTGGATGGCAGCCTGACAATGAGCAGCAGTGGCAGCCTTCAGGCAAGCCCGCGTGGCCTCCTGCCTGGCCTGCTCCCAGCCCCAGCTGACAAACTGACTCCCAAGGGGCCGGGCCAG
Exons
- exon1:67879412~67879503
- exon2:67879587~67879774
- exon3:67879850~67879971
- exon4:67880063~67880216
m6A sites
- 67879609
- 67879656
- 67879663
- 67879692
- 67879715
- 67879733
- 67879740
- 67879751
- 67880115
IRES sequence
- 67880191~67880196
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 236
- Stop: 48
- Length: 369
- Translation cycles: 1
ATGACACCTGACGCCTTCATGACACCTAGCGCCTCCTTGCAGCAGATCACTGCCTCTCCCAGCAGCAGCAGCAGCGGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCTCCCTTACAGCTGTGTCTGCCATGAGCAGCACCTCAGCTGTGGACCCCTCCTTGACCAGGCCACCTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTGGATGGCAGCCTGACAATGAGCAGCAGTGGCAGCCTTCAGGCAAGCCCGCGTGGCCTCCTGCCTGGCCTGCTCCCAGCCCCAGCTGACAAACTGACTCCCAAGGGGCCGGGCCAGGGCACTGCAAGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGA