CircID: TC-hsa-EIF4G3_0202
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:20997601~21050994
Xref:
circAtlas: hsa-EIF4G3_0023
circRNADb: hsa_circ_18643
deepbase2: hsa-circRNA8346-45
circpedia2: HSA_CIRCpedia_107229
circRNADb: hsa_circ_18643
deepbase2: hsa-circRNA8346-45
circpedia2: HSA_CIRCpedia_107229
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.863874
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.21976 | |
| Translation initiation site | 1.0 | |
| SeqComp | 0.64412 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAACCCCTTATCCCTCTGGACAGAATGCAGGTCCAACCACGCTGGTATACCCTCAAACCCCTCAGACAATGAATTCACAACCTCAAACCCGTTCTCCG
Exons
- exon1:21050994~21050866
- exon2:21002808~21002713
IRES sequence
- 21050936~21050927
- 21002739~21002734
Translation initiation site
- 21050939~21050937
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 196
- Stop: 195
- Length: 675
- Translation cycles: 3
ATGAATTCACAACCTCAAACCCGTTCTCCGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAACCCCTTATCCCTCTGGACAGAATGCAGGTCCAACCACGCTGGTATACCCTCAAACCCCTCAGACAATGAATTCACAACCTCAAACCCGTTCTCCGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAACCCCTTATCCCTCTGGACAGAATGCAGGTCCAACCACGCTGGTATACCCTCAAACCCCTCAGACAATGAATTCACAACCTCAAACCCGTTCTCCGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAACCCCTTATCCCTCTGGACAGAATGCAGGTCCAACCACGCTGGTATACCCTCAAACCCCTCAGACA