TransCirc

CircID: TC-hsa-EIF4G3_0248

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr1:21050866~21134013

Gene:

EIF4G3

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-EIF4G3_0187

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.895531 MS Q-Value:
ORF	1.0
IRES sequence	0.24654
Translation initiation site	1.0
SeqComp	0.64899
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

AATTCCTAGAGGACCTGTGCAACAACCTCTTGAGGATCGAATCTTCACTCCCGCTGTCTCAGCAGTCTACAGCACGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAA

Exons

exon1:21089213~21089138
exon2:21050994~21050866

IRES sequence

21050936~21050927
21050867~21089209

Translation initiation site

21050939~21050937

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 17
Stop: 9
Length: 198
Translation cycles: 1

GTGCAACAACCTCTTGAGGATCGAATCTTCACTCCCGCTGTCTCAGCAGTCTACAGCACGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAAATTCCTAG

VQQPLEDRIFTPAVSAVYSTVTQVARQPGTPTPSPYSAHEINKGHPNLAATPPGHASSPGLSQNS*

Start: 180
Stop: 9
Length: 240
Translation cycles: 2

ATGCATCGTCCCCTGGACTCTCTCAAAATTCCTAGAGGACCTGTGCAACAACCTCTTGAGGATCGAATCTTCACTCCCGCTGTCTCAGCAGTCTACAGCACGGTAACACAAGTGGCAAGACAGCCGGGAACCCCTACCCCATCCCCTTATTCAGCACATGAAATAAACAAGGGGCATCCAAATCTTGCGGCAACGCCCCCGGGACATGCATCGTCCCCTGGACTCTCTCAAAATTCCTAG

MHRPLDSLKIPRGPVQQPLEDRIFTPAVSAVYSTVTQVARQPGTPTPSPYSAHEINKGHPNLAATPPGHASSPGLSQNS*