TransCirc

CircID: TC-hsa-ERBB4_0069

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr2:211725076~211750704

Gene:

ERBB4

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-ERBB4_0252

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.769538 MS Q-Value:
ORF	1.0
IRES sequence	0.02035
Translation initiation site	0.0
SeqComp	0.74919
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTGGACGTTGCCATAAGTCCTGTACTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCCAGACTTTGACAAGGACGGTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACAGACTGCTTT

Exons

exon1:211750704~211750639
exon2:211725194~211725076

IRES sequence

211750692~211750687

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 82
Stop: 16
Length: 120
Translation cycles: 1

GTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACAGACTGCTTTGTGGACGTTGCCATAA

VQNNVTADATDLTSVTAAIENVLEAAQDLRTQTALWTLP*

Start: 179
Stop: 69
Length: 261
Translation cycles: 2

CTGCTTTGTGGACGTTGCCATAAGTCCTGTACTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCCAGACTTTGACAAGGACGGTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACAGACTGCTTTGTGGACGTTGCCATAAGTCCTGTACTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCCAGACTTTGA

LLCGRCHKSCTGRCWGPTENHCQTLTRTVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFVDVAISPVLAVAGDPQKIIARL*

Start: 78
Stop: 69
Length: 177
Translation cycles: 1

GTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACAGACTGCTTTGTGGACGTTGCCATAAGTCCTGTACTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCCAGACTTTGA

VCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFVDVAISPVLAVAGDPQKIIARL*