CircID: TC-hsa-FARP1_0045
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr13:98393643~98395476
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.728045
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.01763 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.71042 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GAAGCACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGAATTCGGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGGAGGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAG
Exons
- exon1:98393643~98393718
- exon2:98395227~98395476
m6A sites
- 98395304
- 98395372
- 98395384
- 98395437
- 98395451
IRES sequence
- 98393693~98393698
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 53
- Stop: 56
- Length: 330
- Translation cycles: 1
CTGAATTCGGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGGAGGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGA
- Start: 195
- Stop: 222
- Length: 354
- Translation cycles: 1
CTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGGAGGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGAATTCGGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCTGCGCCGAGGAGAAGCCCCGCGGGTAA