CircID: TC-hsa-GEN1_0020
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr2:17770996~17772784
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.88592
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.32943 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.55649 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTTTAATCGGTGGAATGAAACATCTTGTAACTCTAGTCCACAACTGCTAGTCACTAAAAAACTGGCTCATTGTTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAAATATTGTGAGCCACATGACTATGAATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAA
Exons
- exon1:17771196~17771287
- exon2:17772634~17772784
IRES sequence
- 17771213~17771218
- 17771250~17771256
- 17772666~17772671
- 17772682~17772690
- 17772707~17772715
- 17772774~17771196
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 44
- Stop: 43
- Length: 729
- Translation cycles: 3
CTGCTAGTCACTAAAAAACTGGCTCATTGTTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAAATATTGTGAGCCACATGACTATGAATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGTTTAATCGGTGGAATGAAACATCTTGTAACTCTAGTCCACAACTGCTAGTCACTAAAAAACTGGCTCATTGTTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAAATATTGTGAGCCACATGACTATGAATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGTTTAATCGGTGGAATGAAACATCTTGTAACTCTAGTCCACAACTGCTAGTCACTAAAAAACTGGCTCATTGTTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAAATATTGTGAGCCACATGACTATGAATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGTTTAATCGGTGGAATGAAACATCTTGTAACTCTAGTCCACAA