CircID: TC-hsa-GNB1_0048
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1806475~1825482
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.940872
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.20408 | |
| Translation initiation site | 1.0 | |
| SeqComp | 0.73679 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTGGCATTGAAGAGCACTAAGATCGGAAGATGAGTGAGCTTGACCAGTTACGGCAGGAGGCCGAGCAACTTAAGAACCAGATTCGAGACGCCAGGAAAGCATGTGCAGATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCACGAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAG
Exons
- exon1:1825482~1825397
- exon2:1817875~1817837
- exon3:1815862~1815756
- exon4:1806538~1806475
IRES sequence
- 1825412~1825407
- 1825402~1825397
- 1815857~1815852
- 1815837~1815831
Translation initiation site
- 1825453~1825451
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 109
- Stop: 10
- Length: 198
- Translation cycles: 1
- Start: 30
- Stop: 33
- Length: 300
- Translation cycles: 1
ATGAGTGAGCTTGACCAGTTACGGCAGGAGGCCGAGCAACTTAAGAACCAGATTCGAGACGCCAGGAAAGCATGTGCAGATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCACGAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAGGTGGCATTGAAGAGCACTAAGATCGGAAGATGA