CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1806475~1879902
Gene:
Gene type:
protein_coding
Strand:
-
exons:
ORFS:
circRNA sequence
ATCTCACATTCTTGAAGGTGGCATTGAAGAGCACTAAGATCGGAAGATGAGTGAGCTTGACCAGTTACGGCAGGAGGCCGAGCAACTTAAGAACCAGATTCGAGACGCCAGGAAAGCATGTGCAGATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCACGAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAG
Exons
- exon1:1825499~1825397
- exon2:1817875~1817837
- exon3:1815862~1815756
- exon4:1806538~1806475
IRES sequence
- 1825412~1825407
- 1825402~1825397
- 1815857~1815852
- 1815837~1815831
Translation initiation site
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 289
- Stop: 50
- Length: 75
- Translation cycles: 1
CTGGGACAGCTACACCACCAACAAGATCTCACATTCTTGAAGGTGGCATTGAAGAGCACTAAGATCGGAAGATGA
LGQLHHQQDLTFLKVALKSTKIGR*
- Start: 47
- Stop: 15
- Length: 282
- Translation cycles: 1
ATGAGTGAGCTTGACCAGTTACGGCAGGAGGCCGAGCAACTTAAGAACCAGATTCGAGACGCCAGGAAAGCATGTGCAGATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCACGAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAGATCTCACATTCTTGA
MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKISHS*
- Start: 126
- Stop: 37
- Length: 225
- Translation cycles: 1
ATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCACGAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAGATCTCACATTCTTGAAGGTGGCATTGAAGAGCACTAA
MQLSLRSQTTSTQWEESKCARGGHCGGTWPRSTPCTGAQTPGFSSVPRRMVNLSSGTATPPTRSHILEGGIEEH*