TransCirc

CircID: TC-hsa-GSK3B_0021

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr3:119863419~119863605

Gene:

GSK3B

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-GSK3B_0044
circBase: hsa_circ_0066890
circRNADb: hsa_circ_01715
deepbase2: hsa-circRNA13693-8
circpedia2: HSA_CIRCpedia_43088

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.586222 MS Q-Value:
ORF	1.0
IRES sequence	0.01906
Translation initiation site	0.0
SeqComp	0.56717
m6A sites	1.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCACTGTGTAGCCGTCTGCTGGAGTATACACCAACTGCCCGACTAACACCACTGGAAGCTTGTGCACATTCATTTTTTGATGAATTACGGGACCCAAATGTCAAACTACCAAATGGGCGAGACACACCTGCACTCTTCAACTTCACCACTCAAG

Exons

exon1:119863605~119863419

m6A sites

119863539
119863531
119863527
119863481

IRES sequence

119863548~119863543

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 37
Stop: 44
Length: 195
Translation cycles: 1

CTGTGTAGCCGTCTGCTGGAGTATACACCAACTGCCCGACTAACACCACTGGAAGCTTGTGCACATTCATTTTTTGATGAATTACGGGACCCAAATGTCAAACTACCAAATGGGCGAGACACACCTGCACTCTTCAACTTCACCACTCAAGGTCTTCCGACCCCGAACTCCACCGGAGGCAATTGCACTGTGTAG

LCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQGLPTPNSTGGNCTV*