CircID: TC-hsa-LINC01141_0003
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:20398483~20408810
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 2.2703
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.3297 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.94061 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
AGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAACATAAATTAAACCCAGAGGCAGTCAGCGCCACAGTCCACACTCGTAACCGTTACACTCACCTGGAAATAAAAGTATTTTTGTGCGGGGACTGCAAGGACTAAGCCCGGCCGCACTCCGAGTTTCTCCTCCTCACAGATAGGGGCTGAGGCTCAGAGAGGGCAAGTGACCTGCCCAAAGTCACACAGCCGTGACTCATTGCTCAGGTGAGGAAACTGAGGCTCAGAGAGGGTCCGTGGCATGTCCAAGGTTACTCTGCTGTTAATTGTTTTCTTGGCACTCTCTCCCTTCTCACCTGTGACTACCTGAGTGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGAATGAATGAATCAAGAGAGAGGATCAGAAAGCTGCAGAGGATGATAGATCTGCAAAATTCTCCCTGGGTGAGGCCCAGGCTCAGCTTCCAGAACAGCTCCATCTGTCTCCCACTCACTGAGATTGAACTAATGTCCCACAGTTGGACAGACCTGAAATTGAGCTCTGTGATTTTGG
Exons
- exon1:20406269~20406187
- exon2:20405694~20405575
- exon3:20400987~20400935
- exon4:20399549~20399480
- exon5:20398787~20398483
IRES sequence
- 20406204~20406193
- 20405646~20405639
- 20405637~20405632
- 20399527~20399522
- 20398650~20398644
- 20398605~20398599
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 457
- Stop: 77
- Length: 252
- Translation cycles: 1
- Start: 597
- Stop: 169
- Length: 204
- Translation cycles: 1