CircID: TC-hsa-LRCH1_0033
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr13:46687852~46728984
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.172631
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.42095 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.75168 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
ATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACAGCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTCTGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTAGCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGCCCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGAAGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAGACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGATCAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAGCACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATTCTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGTAACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGCTCCATTTGGCCTGAAGCCTCGATCAGTGTTTCTAAGACCTCAGAGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCTGGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCATGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCACCAGCGGTT
Exons
- exon1:46687852~46687979
- exon2:46689133~46689196
- exon3:46692536~46692641
- exon4:46694893~46695017
- exon5:46699336~46699403
- exon6:46701121~46701207
- exon7:46705068~46705157
- exon8:46705268~46705304
- exon9:46711791~46711844
- exon10:46712525~46712597
- exon11:46723221~46723330
- exon12:46728847~46728984
m6A sites
- 46728932
IRES sequence
- 46687874~46687883
- 46687894~46687899
- 46687907~46687916
- 46689134~46689139
- 46689170~46689176
- 46692577~46692582
- 46692587~46692595
- 46692602~46692607
- 46694954~46694960
- 46695001~46695006
- 46699344~46699349
- 46699371~46699376
- 46699392~46699397
- 46699402~46701127
- 46701150~46701155
- 46701183~46701188
- 46705077~46705084
- 46705098~46705103
- 46705273~46705279
- 46711805~46711810
- 46711843~46712528
- 46723227~46723232
- 46723297~46723302
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 91
- Stop: 90
- Length: 3240
- Translation cycles: 3
ATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTCTGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTAGCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGCCCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGAAGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAGACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGATCAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAGCACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATTCTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGTAACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGCTCCATTTGGCCTGAAGCCTCGATCAGTGTTTCTAAGACCTCAGAGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCTGGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCATGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCACCAGCGGTTATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACAGCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTCTGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTAGCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGCCCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGAAGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAGACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGATCAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAGCACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATTCTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGTAACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGCTCCATTTGGCCTGAAGCCTCGATCAGTGTTTCTAAGACCTCAGAGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCTGGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCATGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCACCAGCGGTTATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACAGCTGACTCCCTTTATCTCCACACCATGGAGAGGCCACATTTACACCAGCACGTGGAAGATGGCAAGAAGGATTCTGATTCGGGAGTTGGAAGTGATAATGGAGATAAGCGATTATCTGCCACCGAGCCTTCTGACGAAGACACTGTTAGCCTCAATGTGCCAATGTCAAACATCATGGAAGAAGAACAGATCATCAAGGAGGACTCGTGCCATCGCCTTAGCCCCGTTAAAGGGGAATTTCATCAGGAATTTCAACCGGAGCCTTCCCTTTTGGGTGACAGCACCAACTCAGGAGAAGAAAGAGACCAGTTTACTGATAGAGCAGATGGTCTCCATTCGGAATTTATGAACTATAAGGCAAGGGCAGAAGACTGTGAAGAGCTGTTACGGATAGAAGAGGATGTGCACTGGCAAACTGAGGGCATAATAAGTTCATCCAAAGATCAGGACATGGATATAGCAATGATCGAGCAGCTGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGATTAAGCACAGATATTACAGAGAGAAGTGTTTTAAACCTATATCCTATGGGATCAGCAGAAGCCTTAGAATTACAAGATTCTGCACTGAATGGTCAAATACAGCTGGAGACATCTCCGGTGTGTGAGGTGCAAAGTGATCTAACATTACAGAGTAACGGGAGCCAGTATTCTCCAAATGAGATTAGAGAGAACTCCCCTGCAGTCTCTCCTACCACAAACAGCACAGCTCCATTTGGCCTGAAGCCTCGATCAGTGTTTCTAAGACCTCAGAGAAATTTGGAATCTATAGACCCGCAGTTTACAATCCGGAGGAAAATGGAGCAGATGAGAGAAGAGAAAGAGCTGGTGGAACAACTTCGTGAGAGCATTGAGATGAGATTGAAGGTCAGTCTACACGAAGACCTGGGGGCAGCCCTCATGGATGGTGTCGTCCTCTGCCATCTGGTCAACCACATCCGCCCACGGTCGGTTGCAAGCATCCATGTCCCATCACCAGCGGTTATTTGCACAAAGGGCAAAGTTCACATATTTAAGTATCTGAGCATACAAGCATGCCAGATTAAGACAGCTGACTCCCTTTATCTCCACACC
MERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVICTKGKVHIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVICTKGKVHIFKYLSIQACQIKTADSLYLHT