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CircID: TC-hsa-MED27_0016

CircRNA information
Taxonomy:
Homo sapiens 
Genome Version:
hg38 
Location:
chr9:132013164~132014467 
Gene:
MED27
Gene type:
protein_coding
Strand:
-
exons:
1
ORFS:
2
Xref:
circAtlas: hsa-MED27_0004
circBase: hsa_circ_0006825
deepbase2: hsa-circRNA15963-1
Evidences
Ribosome/polysome profiling 0.33333
Evidence score: 2.038257
MS Q-Value:
ORF 1.0
IRES sequence 0.0173
Translation initiation site 0.0
SeqComp 0.68762
m6A sites 0.0
MS evidence 0.0
Other evidences Upload
File Author Date
Structure
IRES
m6A
TIS
circRNA sequence
TTGCAGTACCATGCAGGACTAGCATCTGGCCTTTTAAATCAGCAGTCATTGAAGCGTTCCGCTAATCAGATGGGAGTATCTGCCAAACGTAGACCAAAGGCTCAGCCCACAACTCTTGTCCTACCACCTCA
Exons
  • exon1:132014467~132014337
IRES sequence
  • 132014435~132014430
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 70
  • Stop: 22
  • Length: 84
  • Translation cycles: 1
ATGGGAGTATCTGCCAAACGTAGACCAAAGGCTCAGCCCACAACTCTTGTCCTACCACCTCATTGCAGTACCATGCAGGACTAG
MGVSAKRRPKAQPTTLVLPPHCSTMQD*
  • Start: 80
  • Stop: 65
  • Length: 117
  • Translation cycles: 1
CTGCCAAACGTAGACCAAAGGCTCAGCCCACAACTCTTGTCCTACCACCTCATTGCAGTACCATGCAGGACTAGCATCTGGCCTTTTAAATCAGCAGTCATTGAAGCGTTCCGCTAA
LPNVDQRLSPQLLSYHLIAVPCRTSIWPFKSAVIEAFR*