CircID: TC-hsa-MIB2_0001
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:1623431~1628087
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.852276
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.19275 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.65953 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTCCCGAGCAGCCCCGCCCAACATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGACACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGCGCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGACTGCTGCAAGAAGCACGGGCTGCGGGGGATGCGCTGGAAGTGCCGTGTGTGCCTGGACTACGACCTCTGCACGCAGTGCTACATGCACAACAAGCATGAGCTCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGCCCTGTCACACTGAGTCCCCGCCAGGGCCTCCCGAGGATCCCACTAAGGGGCATCTTCCAGGGAGCGAAGGTGGTGCGAGGCCCCGACTGGGAGTGGGGCTCACAGGATGGAGGGGAAGGGAAACCGGGCCGTGTGGTGGACATCCGTGGCTGGGATGTGGAGACAGGCCGGAGTGTGGCCAGCGTGACGTGGGCTGATGGTACCACCAATGTGTACCGTGTGGGCCACAAGGGCAAGGTGGACCTCAAGTGTGTGGGCGAGGCAGCGGGCGGCTTCTACTACAAGGACCACCTCCCAAGGCTCGGCAAGCCGGCGGAGCTGCAGCGCAGGGTGAGTGCTGACAGCCAGCCCTTCCAGCACGGGGACAAGGTCAAGTGTCTGCTGGACACTGATGTCCTGCGGGAGATGCAGGAAGGCCACGGCGGCTGGAACCCCAGGATGGCGGAGACGGGCACCGTGCATCGTATCACGGACCGCGGGGACGTGCGCGTGCAGTTCAACCACGAGACGCGCTGGACCTTCCACCCCGGGGCGCTCACCAAGCACCACTCCTTCTGGGTGGGCGACGTGGTCCGGGTCATCGGCGACCTTGACACAGTGAAGCGGCTGCAGGCTGGGCATGGCGAGTGGACGGACGACATGGCCCCTGCCCTGGGCCGCGTCGGGAAGGTGGTGAAAGTGTTTGGAGACGGGAACCTGCGTGTAGCAGTCGCTGGTCAGCGGTGGACCTTCAGCCCCTCCTGCCTGGTGGCCTACCGGCCCGAGGAGGATGCCAACCTGGACGTGGCCGAGCGCGCCCGGGAGAACAAAAGCTCACTGAGCGTGGCCCTGGACAAGCTTCGGGCCCAGAAGAGTGACCCAGAGCACCCGGGAAGGCTGGTGGTGGAGGTGGCGCTGGGTAACGCAGCCCGGGCTCTGGACCTGCTGCGGAGGCGCCCAGAGCAGGTGGACACCAAGAACCAAGGCAGGACCGCTCTGCAAGTGGCTGCCTACCTGGGCCAGGTGGAGTTGATACGGCTGCTGCTACAAGCCAGGGCGGGCGTGGACCTGCCGGACGACGAGGGCAACACGGCACTGCACTACGCGGCCCTGGGGAACCAGCCCGAGGCCACCAGGGTGCTCCTGAGTGCTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAGCACAGCACTGCACGTGGCCGTGCAGAGGGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGTGACGTCAACCTGCCCGACGCCCACTCGGACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCAGCGGCATTGTCGAG
Exons
- exon1:1623431~1623699
- exon2:1623774~1623945
- exon3:1624795~1624901
- exon4:1624991~1625185
- exon5:1625286~1625428
- exon6:1625558~1625653
- exon7:1626650~1626754
- exon8:1626837~1626999
- exon9:1627074~1627207
- exon10:1627296~1627444
- exon11:1627673~1627829
- exon12:1628019~1628087
IRES sequence
- 1623809~1623814
- 1625383~1625388
- 1626994~1626999
- 1627110~1627115
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 23
- Stop: 297
- Length: 2034
- Translation cycles: 1
ATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGACACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGCGCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGACTGCTGCAAGAAGCACGGGCTGCGGGGGATGCGCTGGAAGTGCCGTGTGTGCCTGGACTACGACCTCTGCACGCAGTGCTACATGCACAACAAGCATGAGCTCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGCCCTGTCACACTGAGTCCCCGCCAGGGCCTCCCGAGGATCCCACTAAGGGGCATCTTCCAGGGAGCGAAGGTGGTGCGAGGCCCCGACTGGGAGTGGGGCTCACAGGATGGAGGGGAAGGGAAACCGGGCCGTGTGGTGGACATCCGTGGCTGGGATGTGGAGACAGGCCGGAGTGTGGCCAGCGTGACGTGGGCTGATGGTACCACCAATGTGTACCGTGTGGGCCACAAGGGCAAGGTGGACCTCAAGTGTGTGGGCGAGGCAGCGGGCGGCTTCTACTACAAGGACCACCTCCCAAGGCTCGGCAAGCCGGCGGAGCTGCAGCGCAGGGTGAGTGCTGACAGCCAGCCCTTCCAGCACGGGGACAAGGTCAAGTGTCTGCTGGACACTGATGTCCTGCGGGAGATGCAGGAAGGCCACGGCGGCTGGAACCCCAGGATGGCGGAGACGGGCACCGTGCATCGTATCACGGACCGCGGGGACGTGCGCGTGCAGTTCAACCACGAGACGCGCTGGACCTTCCACCCCGGGGCGCTCACCAAGCACCACTCCTTCTGGGTGGGCGACGTGGTCCGGGTCATCGGCGACCTTGACACAGTGAAGCGGCTGCAGGCTGGGCATGGCGAGTGGACGGACGACATGGCCCCTGCCCTGGGCCGCGTCGGGAAGGTGGTGAAAGTGTTTGGAGACGGGAACCTGCGTGTAGCAGTCGCTGGTCAGCGGTGGACCTTCAGCCCCTCCTGCCTGGTGGCCTACCGGCCCGAGGAGGATGCCAACCTGGACGTGGCCGAGCGCGCCCGGGAGAACAAAAGCTCACTGAGCGTGGCCCTGGACAAGCTTCGGGCCCAGAAGAGTGACCCAGAGCACCCGGGAAGGCTGGTGGTGGAGGTGGCGCTGGGTAACGCAGCCCGGGCTCTGGACCTGCTGCGGAGGCGCCCAGAGCAGGTGGACACCAAGAACCAAGGCAGGACCGCTCTGCAAGTGGCTGCCTACCTGGGCCAGGTGGAGTTGATACGGCTGCTGCTACAAGCCAGGGCGGGCGTGGACCTGCCGGACGACGAGGGCAACACGGCACTGCACTACGCGGCCCTGGGGAACCAGCCCGAGGCCACCAGGGTGCTCCTGAGTGCTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAGCACAGCACTGCACGTGGCCGTGCAGAGGGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGTGACGTCAACCTGCCCGACGCCCACTCGGACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCAGCGGCATTGTCGAGGTCCCGAGCAGCCCCGCCCAACATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGACACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGCGCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGA
MDPDPQAGVQVGMRVVRGVDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNYRAGYQGAHDLLLYDNAQIGVRHPNIICDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFDRYETAHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKPGRVVDIRGWDVETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKDHLPRLGKPAELQRRVSADSQPFQHGDKVKCLLDTDVLREMQEGHGGWNPRMAETGTVHRITDRGDVRVQFNHETRWTFHPGALTKHHSFWVGDVVRVIGDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVAGQRWTFSPSCLVAYRPEEDANLDVAERARENKSSLSVALDKLRAQKSDPEHPGRLVVEVALGNAARALDLLRRRPEQVDTKNQGRTALQVAAYLGQVELIRLLLQARAGVDLPDDEGNTALHYAALGNQPEATRVLLSAGCRADAINSTQSTALHVAVQRGFLEVVRALCERGCDVNLPDAHSDTPLHSAISAGTGASGIVEVPSSPAQHGPRPPGGRAGGHAGGARRGLEVGPAGRRRGRRGHGGGAWPPRQPLDTRPHSGRAVGPGHAHQLPRRLPGRARPAAVRQRPDRRPAPQHHL*
- Start: 1569
- Stop: 297
- Length: 2247
- Translation cycles: 2
CTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAGCACAGCACTGCACGTGGCCGTGCAGAGGGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGTGACGTCAACCTGCCCGACGCCCACTCGGACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCAGCGGCATTGTCGAGGTCCCGAGCAGCCCCGCCCAACATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGACACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGCGCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGACTGCTGCAAGAAGCACGGGCTGCGGGGGATGCGCTGGAAGTGCCGTGTGTGCCTGGACTACGACCTCTGCACGCAGTGCTACATGCACAACAAGCATGAGCTCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGCCCTGTCACACTGAGTCCCCGCCAGGGCCTCCCGAGGATCCCACTAAGGGGCATCTTCCAGGGAGCGAAGGTGGTGCGAGGCCCCGACTGGGAGTGGGGCTCACAGGATGGAGGGGAAGGGAAACCGGGCCGTGTGGTGGACATCCGTGGCTGGGATGTGGAGACAGGCCGGAGTGTGGCCAGCGTGACGTGGGCTGATGGTACCACCAATGTGTACCGTGTGGGCCACAAGGGCAAGGTGGACCTCAAGTGTGTGGGCGAGGCAGCGGGCGGCTTCTACTACAAGGACCACCTCCCAAGGCTCGGCAAGCCGGCGGAGCTGCAGCGCAGGGTGAGTGCTGACAGCCAGCCCTTCCAGCACGGGGACAAGGTCAAGTGTCTGCTGGACACTGATGTCCTGCGGGAGATGCAGGAAGGCCACGGCGGCTGGAACCCCAGGATGGCGGAGACGGGCACCGTGCATCGTATCACGGACCGCGGGGACGTGCGCGTGCAGTTCAACCACGAGACGCGCTGGACCTTCCACCCCGGGGCGCTCACCAAGCACCACTCCTTCTGGGTGGGCGACGTGGTCCGGGTCATCGGCGACCTTGACACAGTGAAGCGGCTGCAGGCTGGGCATGGCGAGTGGACGGACGACATGGCCCCTGCCCTGGGCCGCGTCGGGAAGGTGGTGAAAGTGTTTGGAGACGGGAACCTGCGTGTAGCAGTCGCTGGTCAGCGGTGGACCTTCAGCCCCTCCTGCCTGGTGGCCTACCGGCCCGAGGAGGATGCCAACCTGGACGTGGCCGAGCGCGCCCGGGAGAACAAAAGCTCACTGAGCGTGGCCCTGGACAAGCTTCGGGCCCAGAAGAGTGACCCAGAGCACCCGGGAAGGCTGGTGGTGGAGGTGGCGCTGGGTAACGCAGCCCGGGCTCTGGACCTGCTGCGGAGGCGCCCAGAGCAGGTGGACACCAAGAACCAAGGCAGGACCGCTCTGCAAGTGGCTGCCTACCTGGGCCAGGTGGAGTTGATACGGCTGCTGCTACAAGCCAGGGCGGGCGTGGACCTGCCGGACGACGAGGGCAACACGGCACTGCACTACGCGGCCCTGGGGAACCAGCCCGAGGCCACCAGGGTGCTCCTGAGTGCTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAGCACAGCACTGCACGTGGCCGTGCAGAGGGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGTGACGTCAACCTGCCCGACGCCCACTCGGACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCAGCGGCATTGTCGAGGTCCCGAGCAGCCCCGCCCAACATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGGGCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGACACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGCGCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGA
LGAGRTPSTAPRAQHCTWPCRGASWRWCGPCVSAAVTSTCPTPTRTRPCTPPSRRALEPAALSRSRAAPPNMDPDPQAGVQVGMRVVRGVDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNYRAGYQGAHDLLLYDNAQIGVRHPNIICDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFDRYETAHSRPVTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKPGRVVDIRGWDVETGRSVASVTWADGTTNVYRVGHKGKVDLKCVGEAAGGFYYKDHLPRLGKPAELQRRVSADSQPFQHGDKVKCLLDTDVLREMQEGHGGWNPRMAETGTVHRITDRGDVRVQFNHETRWTFHPGALTKHHSFWVGDVVRVIGDLDTVKRLQAGHGEWTDDMAPALGRVGKVVKVFGDGNLRVAVAGQRWTFSPSCLVAYRPEEDANLDVAERARENKSSLSVALDKLRAQKSDPEHPGRLVVEVALGNAARALDLLRRRPEQVDTKNQGRTALQVAAYLGQVELIRLLLQARAGVDLPDDEGNTALHYAALGNQPEATRVLLSAGCRADAINSTQSTALHVAVQRGFLEVVRALCERGCDVNLPDAHSDTPLHSAISAGTGASGIVEVPSSPAQHGPRPPGGRAGGHAGGARRGLEVGPAGRRRGRRGHGGGAWPPRQPLDTRPHSGRAVGPGHAHQLPRRLPGRARPAAVRQRPDRRPAPQHHL*