CircID: TC-hsa-MSI1_0003
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr12:120351344~120359053
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.856076
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.24455 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.61152 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
GTGGACGACGCCATGCTGATGTTTGACAAAACCACCAACCGGCACCGAGGGTTCGGGTTTGTCACGTTTGAGAGTGAGGACATCGTGGAGAAAGTGTGTGAAATTCATTTTCATGAAATCAACAACAAAATGGTGGAATGTAAGAAAGCTCAGCCAAAGGAGGTGATGTCGCCAACGGGCTCAGCCCGGGGGAGGTCTCGAGTCATGCCCTACGGAATGGACGCCTTCATGCTGGGCATCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTCGCCCCTGGCTACACCTACCAGTTCCCCGAATTCCGTGTAGAGCGGACCCCTCTCCCGAGCGCCCCAGTCCTCCCCGAGCTTACAG
Exons
- exon1:120359053~120359005
- exon2:120357898~120357816
- exon3:120357019~120356902
- exon4:120353379~120353299
- exon5:120351400~120351344
IRES sequence
- 120359028~120359023
- 120357847~120357841
- 120357831~120357826
- 120357823~120357818
- 120357011~120357006
- 120353338~120353333
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 13
- Stop: 26
- Length: 402
- Translation cycles: 1
ATGCTGATGTTTGACAAAACCACCAACCGGCACCGAGGGTTCGGGTTTGTCACGTTTGAGAGTGAGGACATCGTGGAGAAAGTGTGTGAAATTCATTTTCATGAAATCAACAACAAAATGGTGGAATGTAAGAAAGCTCAGCCAAAGGAGGTGATGTCGCCAACGGGCTCAGCCCGGGGGAGGTCTCGAGTCATGCCCTACGGAATGGACGCCTTCATGCTGGGCATCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTCGCCCCTGGCTACACCTACCAGTTCCCCGAATTCCGTGTAGAGCGGACCCCTCTCCCGAGCGCCCCAGTCCTCCCCGAGCTTACAGGTGGACGACGCCATGCTGATGTTTGA