CircID: TC-hsa-NAA16_0068
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr13:41369090~41372830
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 3.09223
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.40682 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.68541 | |
| m6A sites | 1.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
AAAACTTGTCAGCCAAAGAATTGAAGAAAATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAAACTAGAAGAAGAAAGAAAGCATGCAGAAAGAGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAAGAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAACTTATACCTGAAAAATTAGAAAGGGTAGAAAATCCATTAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTGTCAAACGAGCTTTTGCCATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTTCTAAATCTG
Exons
- exon1:41369090~41369283
- exon2:41372203~41372311
- exon3:41372732~41372830
m6A sites
- 41369157
- 41369190
- 41369196
- 41369259
IRES sequence
- 41369105~41369110
- 41369112~41369117
- 41369134~41369139
- 41369160~41369169
- 41369200~41369220
- 41369224~41369239
- 41369254~41369259
- 41369270~41369277
- 41372208~41372218
- 41372247~41372252
- 41372266~41372271
- 41372294~41372304
- 41372784~41372789
- 41372810~41372819
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 30
- Stop: 29
- Length: 1206
- Translation cycles: 3
ATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAAACTAGAAGAAGAAAGAAAGCATGCAGAAAGAGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAAGAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAACTTATACCTGAAAAATTAGAAAGGGTAGAAAATCCATTAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTGTCAAACGAGCTTTTGCCATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTTCTAAATCTGAAAACTTGTCAGCCAAAGAATTGAAGAAAATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAAACTAGAAGAAGAAAGAAAGCATGCAGAAAGAGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAAGAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAACTTATACCTGAAAAATTAGAAAGGGTAGAAAATCCATTAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTGTCAAACGAGCTTTTGCCATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTTCTAAATCTGAAAACTTGTCAGCCAAAGAATTGAAGAAAATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAAACTAGAAGAAGAAAGAAAGCATGCAGAAAGAGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAAGAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAACTTATACCTGAAAAATTAGAAAGGGTAGAAAATCCATTAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTGTCAAACGAGCTTTTGCCATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTTCTAAATCTGAAAACTTGTCAGCCAAAGAATTGAAGAAA
MLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEASGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVKRAFAINSNNPWLHECLIRFSKSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEASGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVKRAFAINSNNPWLHECLIRFSKSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEASGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVKRAFAINSNNPWLHECLIRFSKSENLSAKELKK